Gene detail

Detailed information of evm.model.Ap12.675 in Astrangia poculata

Genomic Location: Ap12:7571677...7572876
NR annotation: XP_020619575.1, kelch-like protein 2 isoform X1 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5R7B8	Kelch-like protein 20 OS=Pongo abelii OX=9601 GN=KLHL20 PE=2 SV=3
Q5ZKD9	Kelch-like protein 20 OS=Gallus gallus OX=9031 GN=KLHL20 PE=2 SV=1
Q8VCK5	Kelch-like protein 20 OS=Mus musculus OX=10090 GN=Klhl20 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000253 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13964 all species →	Kelch_6	Kelch motif	Repeat	Interproscan
PF07707 all species →	BACK	BTB And C-terminal Kelch	Domain	Interproscan
PF01344 all species →	Kelch_1	Kelch motif	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006652 all species →	Repeat	Kelch repeat type 1	Interproscan
IPR015915 all species →	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR011705 all species →	Domain	BTB/Kelch-associated	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45632 all species →	LD33804P	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10443	KLHL2_3; kelch-like protein 2/3	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.