Gene detail

Detailed information of evm.model.Ap12.764 in Astrangia poculata

Genomic Location: Ap12:8353176...8358214
NR annotation: XP_020622659.1, alkyldihydroxyacetonephosphate synthase, peroxisomal-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P97275	Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Cavia porcellus OX=10141 GN=AGPS PE=1 SV=1
O00116	Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Homo sapiens OX=9606 GN=AGPS PE=1 SV=1
Q9EQR2	Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Rattus norvegicus OX=10116 GN=Agps PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007340 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02913 all species →	FAD-oxidase_C	FAD linked oxidases, C-terminal domain	Domain	Interproscan
PF01565 all species →	FAD_binding_4	FAD binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036318 all species →	Homologous_superfamily	FAD-binding, type PCMH-like superfamily	Interproscan
IPR016166 all species →	Domain	FAD-binding domain, PCMH-type	Interproscan
IPR016169 all species →	Homologous_superfamily	FAD-binding, type PCMH, subdomain 2	Interproscan
IPR016164 all species →	Homologous_superfamily	FAD-linked oxidase-like, C-terminal	Interproscan
IPR016167 all species →	Homologous_superfamily	FAD-binding, type PCMH, subdomain 1	Interproscan
IPR025650 all species →	Family	Alkyldihydroxyacetonephosphate synthase	Interproscan
IPR016171 all species →	Homologous_superfamily	Vanillyl-alcohol oxidase, C-terminal subdomain 2	Interproscan
IPR004113 all species →	Domain	FAD-binding oxidoreductase/transferase, type 4, C-terminal	Interproscan
IPR006094 all species →	Domain	FAD linked oxidase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46568 all species →	ALKYLDIHYDROXYACETONEPHOSPHATE SYNTHASE, PEROXISOMAL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0050660 all species →	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0071949 all species →	Molecular Function	FAD binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0005777 all species →	Cellular Component	peroxisome	Interproscan
GO:0008609 all species →	Molecular Function	alkylglycerone-phosphate synthase activity	Interproscan
GO:0008610 all species →	Biological Process	lipid biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00803	AGPS, agpS; alkyldihydroxyacetonephosphate synthase	EC:2.5.1.26	Peroxisome	ko04146	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.