Detailed information of evm.model.Ap12.895 in Astrangia poculata

Genomic Location: Ap12:9672389...9684351
NR annotation: KAJ7371139.1, Leucine-rich repeat LGI member 3 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003188 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03736
all species →		EPTPEPTP domainRepeatInterproscan
PF01391
all species →		CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009039
all species →		RepeatEARInterproscan
IPR005492
all species →		RepeatLeucine-rich glioma-inactivated , EPTP repeatInterproscan
IPR008160
all species →		RepeatCollagen triple helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15261
all species →		THROMBOSPONDIN-TYPE LAMININ G DOMAIN AND EAR REPEAT-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007165
all species →		Biological Processsignal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.895.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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