Detailed information of evm.model.Ap12.910 in Astrangia poculata

Genomic Location: Ap12:9798815...9818319
NR annotation: XP_020616939.1, pyridoxal-dependent decarboxylase domain-containing protein 1-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6P474Putative pyridoxal-dependent decarboxylase domain-containing protein 2 OS=Homo sapiens OX=9606 GN=PDXDC2P PE=5 SV=3
A7MBC2Pyridoxal-dependent decarboxylase domain-containing protein 1 OS=Bos taurus OX=9913 GN=PDXDC1 PE=2 SV=1
Q6P996Pyridoxal-dependent decarboxylase domain-containing protein 1 OS=Homo sapiens OX=9606 GN=PDXDC1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005296 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00282
all species →		Pyridoxal_deCPyridoxal-dependent decarboxylase conserved domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015421
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR050477
all species →		FamilyGroup II Amino Acid DecarboxylasesInterproscan
IPR002129
all species →		FamilyPyridoxal phosphate-dependent decarboxylaseInterproscan
IPR015424
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42735
all species →		-Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0043231
all species →		Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:0016830
all species →		Molecular Functioncarbon-carbon lyase activityInterproscan
GO:0019752
all species →		Biological Processcarboxylic acid metabolic processInterproscan
GO:0030170
all species →		Molecular Functionpyridoxal phosphate bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.910.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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