Detailed information of evm.model.Ap12.914 in Astrangia poculata

Genomic Location: Ap12:9851577...9856429
NR annotation: XP_020616941.1, uncharacterized protein LOC110054911 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O88783Coagulation factor V OS=Mus musculus OX=10090 GN=F5 PE=1 SV=1
P12259Coagulation factor V OS=Homo sapiens OX=9606 GN=F5 PE=1 SV=4
Q28107Coagulation factor V OS=Bos taurus OX=9913 GN=F5 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004004 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00431
all species →		CUBCUB domainDomainInterproscan
PF02140
all species →		Gal_LectinGalactose binding lectin domainDomainInterproscan
PF00754
all species →		F5_F8_type_CF5/8 type C domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035914
all species →		Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR000421
all species →		DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR000859
all species →		DomainCUB domainInterproscan
IPR050633
all species →		FamilyNeuropilin/Multicopper Oxidase/Coagulation FactorInterproscan
IPR000922
all species →		DomainD-galactoside/L-rhamnose binding SUEL lectin domainInterproscan
IPR043159
all species →		Homologous_superfamilyD-galactoside/L-rhamnose binding SUEL lectin domain superfamilyInterproscan
IPR008979
all species →		Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46806
all species →		F5/8 TYPE C DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0038023
all species →		Molecular Functionsignaling receptor activityInterproscan
GO:0030246
all species →		Molecular Functioncarbohydrate bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.914.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP