Gene detail

Detailed information of evm.model.Ap13.115 in Astrangia poculata

Genomic Location: Ap13:1299044...1312143
NR annotation: KAJ7379867.1, hypothetical protein OS493_012621 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap13.115

atgttatcaaaccaaactgagaatcagtctcatcatgagacagaagcagagtattcgggtgtagtaaacctttcaggtcatcatttaaagagaatagagtgtctacccagaggaatctcaccttatactctctttttaagcaataatgaaatatcaaaggtggagaatttacagtactttgtacacttacaacagctttccctggctggcaaccacattgtggatattaaaggaatcagcgcagcgtcaactttgagagtgctggatctcagtgacaacagtattgtcgccattgaaggtgtcagttcattgaggaatttggaatggttaaacttatctgggaacagcattgagcaaattgaaaatcttgatagaaattacaacctgtatcatctggatttgtcagacaatagcattgctgttatctcaggcttatcaacactcaggaaattaaagactcttttgctgcatggaaatctgatatcttccctagcagtcatcaaagaccaaatatcaaacacagtgtgcaccctgtcactggctgataatgagatatcagacctaaatgaggtgatgcatttgtcttctctgatcaatcttgagcagctgtcactcataaacaatccttgtgtcctacccagtggtgcatggaggcttgaggtgaactacagaccgtatcttgtgtactgctgtagcaacctcaaaaatctggatggacagttggtcaacaatgaagaaagaatgattgcaagactgctggatcaggcattcaatcggatcggccatccttccctaggacaacatgttcagcttgtgtccattttacaccatatttgtagtgatactactcctgtcactcagacaactcaagctgatactggtgatgaccttgactgtaacaaattgttggaatcagagagcttctacattccagttccctcatcagatgtggaccaaacagaatctgatgatgctataatgacagaagaagaagctatccgtctgtttagtttggcagctaccataattcaagctcatgttcgtggttatttagtgagaaaaaagtttgacttctgtcagtaccgacgaaggaattatgctgcagcctgcatccaggcagtttggaagggatactgtgcacgaacaagggacatcaaagttgtcaacattagaaatgaaataagagttcggagacttatttccctaataaacaatttatacaacacaatagagagagaacgcgaggatgctgtcaagagcagggaacagttgaaaacagctataaaatatctttggtatcagattacagaacagaaaagattgaatcaaattcagcttcacaaagaacaagtcaaggcggcaattaaaattcaagcttggtggagggggtgtatgtgcaaaaaggcgtttcctcgcaagaatttaaacagagataaagttaccatgctcttttccttgtgtcgcaagctacagttgcagttggatgtagtcacgttacagataaatggaataacaaatggtgcaaaacaaagcaaaacatctctgcccgaagagcagatggattcagaagggcaggaccggttctatgacacagtcggtcagttggattcatctcaagacaccatctcccctttacttgaaggagaagtgaaccacacgaacactcgtacgggtgcgactgctgttcagggagcagataccaacgttggtgcatgtaccgctcactcgttagacgatgcacaggctgacaagacaggagatctgagaaagcctgaaaacaacatacctgagccaggtcaaattgagtctgaagaagagtttgtgtgttcaaatgcttctgttccattgcatcctgaagtgggtaaaacggtgccatctttaggtggtcaaatggacaatgaagcgcatgaaatggctttatcaaacttgtataaaatggacattggatcgagtaaagtggcttcatcgattgatcttgaagaaggcaatctggtgacatcaactctaacagagaaggaagatgggtcatcatcatccattgaccacacggaacatgacgacaacgacgaagagcaagcatttgatggacctacagaacttaaaaacggcgaagtagctccctctactcacactgaagaagatcttcaggaggacagtggagctctgttgcctattggccagcaggaacctcgaagtgaaaccgaggctcatgcagatgatgttcaaatagataacttagaagaggacactccttcatgcgcgggaatgccaccaagagttgtagtgtctgaaggattggagctgactgacgaagctccaaacgaggcagcttctgtggaagaaaccttgcatgttagcataccggagataattgtgagtagtcctgtgcctacagatgatgaaggtagtgatgcggggtctgctgttgaaggtgacacgaatgacgtgcaacaggaagttgaagacaatgggacagagaggcgagacgttgctgacaaccagttccattcagattcgtctcggaagtcaccaagatcttctacagaaaaggaaagtcataaaactgaagaagatacactcactgatgaaaccaaagaggacaacacgtgccccaaacaggaaggtggcatcaccaaactactccatgaaggtaatctcttgccttttaggagcacaaaagattactcggtttccaaagaggcaagtaccgaaaaacctgacaaagaaacaattgcagaccaaacaagcagcactatttcgcaggaaagcgtatctaacttgggagaaagagccagcagcctactgtcacagctcaggtcagaaatcgccagtatgaaaactgctcgacttagcagtgtctctccaatcgtagcttctgaaagcgatggtaatgctacagaaatttcacaagagcgtgacacatctcaaccaacatcgcaagagcgtgacacaactcaaccagcatcgcaagagcgtgacataactcaaccagcaccagtttctcctgtcacgtatcgtctaccgttgtttgaagacttggacagcgcatgtacatctttctctctggatgaccttcttgccgaccccattattgaagaagatgcaaatcctgcttcagaagctgataatatacatgaaggaggggatgattga

Transcript

evm.model.Ap13.115

ATGTTATCAAACCAAACTGAGAATCAGTCTCATCATGAGACAGAAGCAGAGTATTCGGGTGTAGTAAACCTTTCAGGTCATCATTTAAAGAGAATAGAGTGTCTACCCAGAGGAATCTCACCTTATACTCTCTTTTTAAGCAATAATGAAATATCAAAGGTGGAGAATTTACAGTACTTTGTACACTTACAACAGCTTTCCCTGGCTGGCAACCACATTGTGGATATTAAAGGAATCAGCGCAGCGTCAACTTTGAGAGTGCTGGATCTCAGTGACAACAGTATTGTCGCCATTGAAGGTGTCAGTTCATTGAGGAATTTGGAATGGTTAAACTTATCTGGGAACAGCATTGAGCAAATTGAAAATCTTGATAGAAATTACAACCTGTATCATCTGGATTTGTCAGACAATAGCATTGCTGTTATCTCAGGCTTATCAACACTCAGGAAATTAAAGACTCTTTTGCTGCATGGAAATCTGATATCTTCCCTAGCAGTCATCAAAGACCAAATATCAAACACAGTGTGCACCCTGTCACTGGCTGATAATGAGATATCAGACCTAAATGAGGTGATGCATTTGTCTTCTCTGATCAATCTTGAGCAGCTGTCACTCATAAACAATCCTTGTGTCCTACCCAGTGGTGCATGGAGGCTTGAGGTGAACTACAGACCGTATCTTGTGTACTGCTGTAGCAACCTCAAAAATCTGGATGGACAGTTGGTCAACAATGAAGAAAGAATGATTGCAAGACTGCTGGATCAGGCATTCAATCGGATCGGCCATCCTTCCCTAGGACAACATGTTCAGCTTGTGTCCATTTTACACCATATTTGTAGTGATACTACTCCTGTCACTCAGACAACTCAAGCTGATACTGGTGATGACCTTGACTGTAACAAATTGTTGGAATCAGAGAGCTTCTACATTCCAGTTCCCTCATCAGATGTGGACCAAACAGAATCTGATGATGCTATAATGACAGAAGAAGAAGCTATCCGTCTGTTTAGTTTGGCAGCTACCATAATTCAAGCTCATGTTCGTGGTTATTTAGTGAGAAAAAAGTTTGACTTCTGTCAGTACCGACGAAGGAATTATGCTGCAGCCTGCATCCAGGCAGTTTGGAAGGGATACTGTGCACGAACAAGGGACATCAAAGTTGTCAACATTAGAAATGAAATAAGAGTTCGGAGACTTATTTCCCTAATAAACAATTTATACAACACAATAGAGAGAGAACGCGAGGATGCTGTCAAGAGCAGGGAACAGTTGAAAACAGCTATAAAATATCTTTGGTATCAGATTACAGAACAGAAAAGATTGAATCAAATTCAGCTTCACAAAGAACAAGTCAAGGCGGCAATTAAAATTCAAGCTTGGTGGAGGGGGTGTATGTGCAAAAAGGCGTTTCCTCGCAAGAATTTAAACAGAGATAAAGTTACCATGCTCTTTTCCTTGTGTCGCAAGCTACAGTTGCAGTTGGATGTAGTCACGTTACAGATAAATGGAATAACAAATGGTGCAAAACAAAGCAAAACATCTCTGCCCGAAGAGCAGATGGATTCAGAAGGGCAGGACCGGTTCTATGACACAGTCGGTCAGTTGGATTCATCTCAAGACACCATCTCCCCTTTACTTGAAGGAGAAGTGAACCACACGAACACTCGTACGGGTGCGACTGCTGTTCAGGGAGCAGATACCAACGTTGGTGCATGTACCGCTCACTCGTTAGACGATGCACAGGCTGACAAGACAGGAGATCTGAGAAAGCCTGAAAACAACATACCTGAGCCAGGTCAAATTGAGTCTGAAGAAGAGTTTGTGTGTTCAAATGCTTCTGTTCCATTGCATCCTGAAGTGGGTAAAACGGTGCCATCTTTAGGTGGTCAAATGGACAATGAAGCGCATGAAATGGCTTTATCAAACTTGTATAAAATGGACATTGGATCGAGTAAAGTGGCTTCATCGATTGATCTTGAAGAAGGCAATCTGGTGACATCAACTCTAACAGAGAAGGAAGATGGGTCATCATCATCCATTGACCACACGGAACATGACGACAACGACGAAGAGCAAGCATTTGATGGACCTACAGAACTTAAAAACGGCGAAGTAGCTCCCTCTACTCACACTGAAGAAGATCTTCAGGAGGACAGTGGAGCTCTGTTGCCTATTGGCCAGCAGGAACCTCGAAGTGAAACCGAGGCTCATGCAGATGATGTTCAAATAGATAACTTAGAAGAGGACACTCCTTCATGCGCGGGAATGCCACCAAGAGTTGTAGTGTCTGAAGGATTGGAGCTGACTGACGAAGCTCCAAACGAGGCAGCTTCTGTGGAAGAAACCTTGCATGTTAGCATACCGGAGATAATTGTGAGTAGTCCTGTGCCTACAGATGATGAAGGTAGTGATGCGGGGTCTGCTGTTGAAGGTGACACGAATGACGTGCAACAGGAAGTTGAAGACAATGGGACAGAGAGGCGAGACGTTGCTGACAACCAGTTCCATTCAGATTCGTCTCGGAAGTCACCAAGATCTTCTACAGAAAAGGAAAGTCATAAAACTGAAGAAGATACACTCACTGATGAAACCAAAGAGGACAACACGTGCCCCAAACAGGAAGGTGGCATCACCAAACTACTCCATGAAGGTAATCTCTTGCCTTTTAGGAGCACAAAAGATTACTCGGTTTCCAAAGAGGCAAGTACCGAAAAACCTGACAAAGAAACAATTGCAGACCAAACAAGCAGCACTATTTCGCAGGAAAGCGTATCTAACTTGGGAGAAAGAGCCAGCAGCCTACTGTCACAGCTCAGGTCAGAAATCGCCAGTATGAAAACTGCTCGACTTAGCAGTGTCTCTCCAATCGTAGCTTCTGAAAGCGATGGTAATGCTACAGAAATTTCACAAGAGCGTGACACATCTCAACCAACATCGCAAGAGCGTGACACAACTCAACCAGCATCGCAAGAGCGTGACATAACTCAACCAGCACCAGTTTCTCCTGTCACGTATCGTCTACCGTTGTTTGAAGACTTGGACAGCGCATGTACATCTTTCTCTCTGGATGACCTTCTTGCCGACCCCATTATTGAAGAAGATGCAAATCCTGCTTCAGAAGCTGATAATATACATGAAGGAGGGGATGATTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8IW35	Centrosomal protein of 97 kDa OS=Homo sapiens OX=9606 GN=CEP97 PE=1 SV=1
Q9CZ62	Centrosomal protein of 97 kDa OS=Mus musculus OX=10090 GN=Cep97 PE=1 SV=1
Q6GPJ8	Centrosomal protein of 97 kDa OS=Xenopus laevis OX=8355 GN=cep97 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006348 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14580 all species →	LRR_9	Leucine-rich repeat	Repeat	Interproscan
PF00612 all species →	IQ	IQ calmodulin-binding motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR003591 all species →	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR050576 all species →	Family	Ciliary and flagellar integrity-associated protein	Interproscan
IPR000048 all species →	Binding_site	IQ motif, EF-hand binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45973 all species →	PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16717	CEP97; centrosomal protein CEP97	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.