Detailed information of evm.model.Ap13.1235 in Astrangia poculata

Genomic Location: Ap13:12848447...12935412
NR annotation: CAH3145562.1, unnamed protein product [Pocillopora meandrina]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6YHU6tRNA (32-2'-O)-methyltransferase regulator THADA OS=Homo sapiens OX=9606 GN=THADA PE=1 SV=1
A8C750tRNA (32-2'-O)-methyltransferase regulator THADA OS=Canis lupus familiaris OX=9615 GN=THADA PE=2 SV=1
A8C752tRNA (32-2'-O)-methyltransferase regulator THADA OS=Chlorocebus aethiops OX=9534 GN=THADA PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001290 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10350
all species →		DUF2428THADA/TRM732, DUF2428DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019442
all species →		DomainTHADA/TRM732, DUF2428Interproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR051954
all species →		FamilytRNA (32-2'-O)-methyltransferase regulator THADAInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14387
all species →		THADA/DEATH RECEPTOR INTERACTING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0030488
all species →		Biological ProcesstRNA methylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap13.1235.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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