Detailed information of evm.model.Ap13.1278 in Astrangia poculata

Genomic Location: Ap13:13433489...13492526
NR annotation: CAH3145483.1, unnamed protein product [Pocillopora meandrina]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A6H7B5COP9 signalosome complex subunit 3 OS=Bos taurus OX=9913 GN=COPS3 PE=2 SV=1
Q9UNS2COP9 signalosome complex subunit 3 OS=Homo sapiens OX=9606 GN=COPS3 PE=1 SV=3
Q4R898COP9 signalosome complex subunit 3 OS=Macaca fascicularis OX=9541 GN=COPS3 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005579 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01399
all species →		PCIPCI domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000717
all species →		DomainProteasome component (PCI) domainInterproscan
IPR050756
all species →		FamilyCOP9 signalosome complex subunit 3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10758
all species →		26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006511
all species →		Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0008180
all species →		Cellular ComponentCOP9 signalosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap13.1278.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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