Detailed information of evm.model.Ap13.1311.1.5f15ded1 in Astrangia poculata

Genomic Location: Ap13:13871632...13898589
NR annotation: XP_020624941.1, HEAT repeat-containing protein 5B-like isoform X2 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A1A5F2HEAT repeat-containing protein 5B OS=Xenopus tropicalis OX=8364 GN=heatr5b PE=2 SV=1
Q8C547HEAT repeat-containing protein 5B OS=Mus musculus OX=10090 GN=Heatr5b PE=1 SV=3
Q9P2D3HEAT repeat-containing protein 5B OS=Homo sapiens OX=9606 GN=HEATR5B PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003335 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20210
all species →		Laa1_Sip1_HTR5Laa1/Sip1/HEATR5 HEAT repeat regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan
IPR046837
all species →		RepeatLaa1/Sip1/HEATR5-like, HEAT repeat regionInterproscan
IPR040108
all species →		FamilyLaa1/Sip1/HEATR5Interproscan
IPR021133
all species →		RepeatHEAT, type 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21663
all species →		HYPOTHETICAL HEAT DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005794
all species →		Cellular ComponentGolgi apparatusInterproscan
GO:0006897
all species →		Biological ProcessendocytosisInterproscan
GO:0008104
all species →		Biological Processprotein localizationInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0030139
all species →		Cellular Componentendocytic vesicleInterproscan
GO:0042147
all species →		Biological Processretrograde transport, endosome to GolgiInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap13.1311.1.5f15ded1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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