Gene detail

Detailed information of evm.model.Ap13.1353 in Astrangia poculata

Genomic Location: Ap13:14325921...14328348
NR annotation: XP_020628136.1, dnaJ homolog subfamily C member 24-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q54CI5	DPH4 homolog OS=Dictyostelium discoideum OX=44689 GN=dph4 PE=3 SV=1
Q8NHS0	DnaJ homolog subfamily B member 8 OS=Homo sapiens OX=9606 GN=DNAJB8 PE=1 SV=1
Q2JW78	Chaperone protein DnaJ OS=Synechococcus sp. (strain JA-3-3Ab) OX=321327 GN=dnaJ PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002939 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05207 all species →	zf-CSL	CSL zinc finger	Domain	Interproscan
PF00226 all species →	DnaJ	DnaJ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036869 all species →	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR001623 all species →	Domain	DnaJ domain	Interproscan
IPR007872 all species →	Domain	DPH-type metal-binding domain	Interproscan
IPR042978 all species →	Family	DnaJ homolog subfamily C member 24	Interproscan
IPR036671 all species →	Homologous_superfamily	DPH-type metal-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45255 all species →	DNAJ HOMOLOG SUBFAMILY C MEMBER 24	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0001671 all species →	Molecular Function	ATPase activator activity	Interproscan
GO:0008198 all species →	Molecular Function	ferrous iron binding	Interproscan
GO:0032781 all species →	Biological Process	positive regulation of ATP-dependent activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17867	DPH4, DNAJC24; diphthamide biosynthesis protein 4	-	Translation factors	ko03012	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.