Gene detail

Detailed information of evm.model.Ap13.1435 in Astrangia poculata

Genomic Location: Ap13:15323008...15336459
NR annotation: XP_020608134.1, uncharacterized protein LOC110046768 isoform X1 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
E5EZW7	Sensory neuron membrane protein 1 OS=Ostrinia furnacalis OX=93504 GN=Snmp1 PE=2 SV=1
E5EZW6	Sensory neuron membrane protein 1 OS=Ostrinia nubilalis OX=29057 GN=SNMP1 PE=2 SV=1
Q9GPH7	Sensory neuron membrane protein 1 OS=Manduca sexta OX=7130 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003016 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01130 all species →	CD36	CD36 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002159 all species →	Family	CD36 family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11923 all species →	SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005044 all species →	Molecular Function	scavenger receptor activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12384	SCARB2, LIMP2, CD36L2; lysosome membrane protein 2	-	Lysosome	ko04142	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.