Detailed information of evm.model.Ap13.177 in Astrangia poculata

Genomic Location: Ap13:2024257...2032123
NR annotation: XP_020607390.1, BRCA1-A complex subunit BRE-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B6NXD5BRISC and BRCA1-A complex member 2 OS=Branchiostoma floridae OX=7739 GN=BABAM2 PE=3 SV=1
Q5ZML0BRISC and BRCA1-A complex member 2 OS=Gallus gallus OX=9031 GN=BABAM2 PE=2 SV=1
A6QQW8BRISC and BRCA1-A complex member 2 OS=Bos taurus OX=9913 GN=BABAM2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006755 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06113
all species →		BREBrain and reproductive organ-expressed protein (BRE)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010358
all species →		FamilyBRCA1-A complex subunit BREInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15189
all species →		BRISC AND BRCA1-A COMPLEX MEMBER 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0070531
all species →		Cellular ComponentBRCA1-A complexInterproscan
GO:0070552
all species →		Cellular ComponentBRISC complexInterproscan
GO:0006302
all species →		Biological Processdouble-strand break repairInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap13.177.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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