Detailed information of evm.model.Ap13.1862 in Astrangia poculata

Genomic Location: Ap13:19939247...19968586
NR annotation: XP_020605865.1, uncharacterized protein LOC110044643 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001593 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13517
all species →		FG-GAP_3FG-GAP-like repeatRepeatInterproscan
PF07593
all species →		UnbV_ASPICASPIC and UnbVFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027039
all species →		FamilyCartilage acidic protein 1Interproscan
IPR028994
all species →		Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR013517
all species →		RepeatFG-GAP repeatInterproscan
IPR011519
all species →		DomainASPIC/UnbVInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16026
all species →		CARTILAGE ACIDIC PROTEIN 1Interproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap13.1862. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap13.1862.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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