Detailed information of evm.model.Ap13.1886 in Astrangia poculata

Genomic Location: Ap13:20253000...20253473
NR annotation: CAH3127938.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P90543Histone H3 OS=Euplotes crassus OX=5936 PE=3 SV=3
Q402E2Histone H3.3a OS=Lilium longiflorum OX=4690 GN=MPH3 PE=2 SV=3
P59169Histone H3.3 OS=Arabidopsis thaliana OX=3702 GN=HTR4 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000353 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00125
all species →		HistoneCore histone H2A/H2B/H3/H4DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000164
all species →		FamilyHistone H3/CENP-AInterproscan
IPR009072
all species →		Homologous_superfamilyHistone-foldInterproscan
IPR007125
all species →		DomainHistone H2A/H2B/H3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11426
all species →		HISTONE H3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000786
all species →		Cellular ComponentnucleosomeInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0030527
all species →		Molecular Functionstructural constituent of chromatinInterproscan
GO:0046982
all species →		Molecular Functionprotein heterodimerization activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap13.1886.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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