Detailed information of evm.model.Ap13.2125 in Astrangia poculata

Genomic Location: Ap13:22904372...22914563
NR annotation: XP_022798722.1, leucine-rich repeat-containing protein 73-like [Stylophora pistillata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5JTD7Leucine-rich repeat-containing protein 73 OS=Homo sapiens OX=9606 GN=LRRC73 PE=1 SV=1
Q587K4Leucine-rich repeat-containing protein 73 OS=Rattus norvegicus OX=10116 GN=Lrrc73 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008419 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13516
all species →		LRR_6Leucine Rich repeatRepeatInterproscan
PF00652
all species →		Ricin_B_lectinRicin-type beta-trefoil lectin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR035992
all species →		Homologous_superfamilyRicin B-like lectinsInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR052201
all species →		FamilyLeucine-rich repeat-containing regulator of pluripotencyInterproscan
IPR000772
all species →		DomainRicin B, lectin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24111
all species →		LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap13.2125.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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