Detailed information of evm.model.Ap13.2177 in Astrangia poculata

Genomic Location: Ap13:23447106...23452066
NR annotation: XP_027050309.1, protein cornichon homolog 1-like [Pocillopora damicornis]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5BIN6Protein cornichon homolog 1 OS=Bos taurus OX=9913 GN=CNIH1 PE=2 SV=1
O95406Protein cornichon homolog 1 OS=Homo sapiens OX=9606 GN=CNIH1 PE=1 SV=1
O35372Protein cornichon homolog 1 OS=Mus musculus OX=10090 GN=Cnih1 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002654 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03311
all species →		CornichonCornichon proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003377
all species →		FamilyCornichonInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12290
all species →		CORNICHON-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan
GO:0005789
all species →		Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0006888
all species →		Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0030134
all species →		Cellular ComponentCOPII-coated ER to Golgi transport vesicleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K20368CNIH, ERV14; protein cornichon-Transportersko02000deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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