Detailed information of evm.model.Ap13.2349 in Astrangia poculata

Genomic Location: Ap13:25088955...25090053
NR annotation: CAH3153175.1, unnamed protein product [Porites evermanni]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5U5C5U4/U6 small nuclear ribonucleoprotein Prp31 OS=Xenopus laevis OX=8355 GN=prpf31 PE=2 SV=1
Q8WWY3U4/U6 small nuclear ribonucleoprotein Prp31 OS=Homo sapiens OX=9606 GN=PRPF31 PE=1 SV=2
Q8CCF0U4/U6 small nuclear ribonucleoprotein Prp31 OS=Mus musculus OX=10090 GN=Prpf31 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007795 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09785
all species →		Prp31_CPrp31 C terminal domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019175
all species →		DomainPrp31 C-terminalInterproscan
IPR027105
all species →		FamilyU4/U6 small nuclear ribonucleoprotein Prp31Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13904
all species →		PRE-MRNA SPLICING FACTOR PRP31Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000244
all species →		Biological Processspliceosomal tri-snRNP complex assemblyInterproscan
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005687
all species →		Cellular ComponentU4 snRNPInterproscan
GO:0046540
all species →		Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan
GO:0071011
all species →		Cellular Componentprecatalytic spliceosomeInterproscan
GO:0097526
all species →		Cellular Componentspliceosomal tri-snRNP complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap13.2349.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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