Gene detail

Detailed information of evm.model.Ap13.236 in Astrangia poculata

Genomic Location: Ap13:2629545...2648387
NR annotation: CAH3037858.1, unnamed protein product [Porites lobata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap13.236

atgttctactccttcgtagtaatattttcagctttgatctcagccagcgcggctgatctttcttctgagttcgctcaccacgcagtgttagacccagcggagttgatgaagctctactggacggttgactgggataaggaaaccgtctcgttcgctgttgaggcggcaactacaggatgggttggtttcggcttctcttcagggaacgggaaaatggccggtagcgacgtggtaatcgggtgggtgaaagactccaagggttatttgacgttgttgtcggatcaagagcaactagcaagcatgttctacttcgtagtaatattctcagctttgatctcagccagcgcggctgatctttcatctgagttcgctcaccatgcagtgttagacccagcggaactgatgaagctgtattggacggttgactgggataaggaaaccgtctcgttcgctgttgaggcggcaactacaggatgggttggtttcggcttctcttcagggaatgggaaaatggccggtagcgacgtggtaatcgggtgggtgaaagactctaagggttatttgacggaccgctttgctgacgcggaaaaattgccacctttggacaaggaaaacaattacgtgttgactggcttcgaggaaagtgaccaaaaaacagtgttgcgatttaacagaaagtttgacacttgcgatccaagggacaggaagattaagcaaggtacaacgaaggtggtgttcgcctttcatacagaggacccaaagtctgatgatgatattaaatatcacacgtttagagggtcaaggagcatacttcttctcaacaacatggacgagaaagaagtcgatgagacagggtggaaaagttttgtcatggtgaacaaaaatataacgattcctaaaaagcggacaacctactggtgttctctgatcaaggccccgaaaatcgacagcaagcatcacataacaaagttcgtgccatatatccaaaaggggaacgaaggactagtgcatcacctggtgatttatgagtgccacaataatggacagtttaatgaaagcgttcactacggccccggatatgattgcaatgactacgccaatatgccatttctacaatgctacttttttagtatagtgggacgcaaagacagctccggactgcgttttttctacacctcgaatctccgtaagtacgatgctggtataattgctgtcggggaatcgagtcttccatttatggtcatcccacctaaacaagaatcgtggatatctaccgggtactgccccaaacaatgcagtcaggaaagtttaaattcgacaaagctgccagagaaaggaattaacgtgtttgctgcatttcttcacactcatcttcaaggaaccggaatatggacaaaacatgtgcgcgatggagttgaactaccagaaattgtacgggatgacaattatgatttcaactttcaggatatccaagttttaagcaaggaagttcacgtgaagccgggagacgacttgatcacctactgcagataccaaacaatggataagaacaaaattgtcgtgggtggcctagctacgtctcaggagatgtgcgtagatatgttattttactacccaaagatggaaaaagattcaaactgcaacagcattcaatacaaaccagtacatgacttcattggcaagtactttccacaacttaaaccacaacttacgtcactgcattacaatcctcttgttgccatgaatatcacatggactaaagaaatggtggcagacttaagaaagagatacgatgaagcgaaaaccttgattccaacttgcaaacatgtttggggacaggcaccaccgtacaacacaataccgattccaaggatcaccaaaccactgccaccaccaaagtcaaaatgtcaggaggagatcgaaagtaactcctctgttaaagctgcccctgctacttttgttttgtttttatctggattcatggccatgtttctgtga

Transcript

evm.model.Ap13.236

ATGTTCTACTCCTTCGTAGTAATATTTTCAGCTTTGATCTCAGCCAGCGCGGCTGATCTTTCTTCTGAGTTCGCTCACCACGCAGTGTTAGACCCAGCGGAGTTGATGAAGCTCTACTGGACGGTTGACTGGGATAAGGAAACCGTCTCGTTCGCTGTTGAGGCGGCAACTACAGGATGGGTTGGTTTCGGCTTCTCTTCAGGGAACGGGAAAATGGCCGGTAGCGACGTGGTAATCGGGTGGGTGAAAGACTCCAAGGGTTATTTGACGTTGTTGTCGGATCAAGAGCAACTAGCAAGCATGTTCTACTTCGTAGTAATATTCTCAGCTTTGATCTCAGCCAGCGCGGCTGATCTTTCATCTGAGTTCGCTCACCATGCAGTGTTAGACCCAGCGGAACTGATGAAGCTGTATTGGACGGTTGACTGGGATAAGGAAACCGTCTCGTTCGCTGTTGAGGCGGCAACTACAGGATGGGTTGGTTTCGGCTTCTCTTCAGGGAATGGGAAAATGGCCGGTAGCGACGTGGTAATCGGGTGGGTGAAAGACTCTAAGGGTTATTTGACGGACCGCTTTGCTGACGCGGAAAAATTGCCACCTTTGGACAAGGAAAACAATTACGTGTTGACTGGCTTCGAGGAAAGTGACCAAAAAACAGTGTTGCGATTTAACAGAAAGTTTGACACTTGCGATCCAAGGGACAGGAAGATTAAGCAAGGTACAACGAAGGTGGTGTTCGCCTTTCATACAGAGGACCCAAAGTCTGATGATGATATTAAATATCACACGTTTAGAGGGTCAAGGAGCATACTTCTTCTCAACAACATGGACGAGAAAGAAGTCGATGAGACAGGGTGGAAAAGTTTTGTCATGGTGAACAAAAATATAACGATTCCTAAAAAGCGGACAACCTACTGGTGTTCTCTGATCAAGGCCCCGAAAATCGACAGCAAGCATCACATAACAAAGTTCGTGCCATATATCCAAAAGGGGAACGAAGGACTAGTGCATCACCTGGTGATTTATGAGTGCCACAATAATGGACAGTTTAATGAAAGCGTTCACTACGGCCCCGGATATGATTGCAATGACTACGCCAATATGCCATTTCTACAATGCTACTTTTTTAGTATAGTGGGACGCAAAGACAGCTCCGGACTGCGTTTTTTCTACACCTCGAATCTCCGTAAGTACGATGCTGGTATAATTGCTGTCGGGGAATCGAGTCTTCCATTTATGGTCATCCCACCTAAACAAGAATCGTGGATATCTACCGGGTACTGCCCCAAACAATGCAGTCAGGAAAGTTTAAATTCGACAAAGCTGCCAGAGAAAGGAATTAACGTGTTTGCTGCATTTCTTCACACTCATCTTCAAGGAACCGGAATATGGACAAAACATGTGCGCGATGGAGTTGAACTACCAGAAATTGTACGGGATGACAATTATGATTTCAACTTTCAGGATATCCAAGTTTTAAGCAAGGAAGTTCACGTGAAGCCGGGAGACGACTTGATCACCTACTGCAGATACCAAACAATGGATAAGAACAAAATTGTCGTGGGTGGCCTAGCTACGTCTCAGGAGATGTGCGTAGATATGTTATTTTACTACCCAAAGATGGAAAAAGATTCAAACTGCAACAGCATTCAATACAAACCAGTACATGACTTCATTGGCAAGTACTTTCCACAACTTAAACCACAACTTACGTCACTGCATTACAATCCTCTTGTTGCCATGAATATCACATGGACTAAAGAAATGGTGGCAGACTTAAGAAAGAGATACGATGAAGCGAAAACCTTGATTCCAACTTGCAAACATGTTTGGGGACAGGCACCACCGTACAACACAATACCGATTCCAAGGATCACCAAACCACTGCCACCACCAAAGTCAAAATGTCAGGAGGAGATCGAAAGTAACTCCTCTGTTAAAGCTGCCCCTGCTACTTTTGTTTTGTTTTTATCTGGATTCATGGCCATGTTTCTGTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9CXI3	DBH-like monooxygenase protein 1 OS=Mus musculus OX=10090 GN=Moxd1 PE=1 SV=1
Q6UVY6	DBH-like monooxygenase protein 1 OS=Homo sapiens OX=9606 GN=MOXD1 PE=1 SV=1
P15101	Dopamine beta-hydroxylase OS=Bos taurus OX=9913 GN=DBH PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000454 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03351 all species →	DOMON	DOMON domain	Domain	Interproscan
PF01082 all species →	Cu2_monooxygen	Copper type II ascorbate-dependent monooxygenase, N-terminal domain	Domain	Interproscan
PF03712 all species →	Cu2_monoox_C	Copper type II ascorbate-dependent monooxygenase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036939 all species →	Homologous_superfamily	Copper type II, ascorbate-dependent monooxygenase, N-terminal domain superfamily	Interproscan
IPR005018 all species →	Domain	DOMON domain	Interproscan
IPR028460 all species →	Family	Tyramine beta-hydroxylase/Dopamine beta-hydroxylase	Interproscan
IPR008977 all species →	Homologous_superfamily	PHM/PNGase F domain superfamily	Interproscan
IPR014784 all species →	Homologous_superfamily	Copper type II, ascorbate-dependent monooxygenase-like, C-terminal	Interproscan
IPR000945 all species →	Family	Dopamine beta-hydroxylase-like	Interproscan
IPR000323 all species →	Domain	Copper type II, ascorbate-dependent monooxygenase, N-terminal	Interproscan
IPR045266 all species →	Domain	Copper-dependent monooxygenases, DOMON domain	Interproscan
IPR024548 all species →	Domain	Copper type II ascorbate-dependent monooxygenase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10157 all species →	DOPAMINE BETA HYDROXYLASE RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004497 all species →	Molecular Function	monooxygenase activity	Interproscan
GO:0005507 all species →	Molecular Function	copper ion binding	Interproscan
GO:0016715 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0004500 all species →	Molecular Function	dopamine beta-monooxygenase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap13.236.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.