Detailed information of evm.model.Ap13.2480 in Astrangia poculata

Genomic Location: Ap13:26467461...26468751
NR annotation: KAJ7374373.1, Breast cancer metastasis-suppressor 1-like protein [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q1LZE0Breast cancer metastasis-suppressor 1 homolog OS=Bos taurus OX=9913 GN=BRMS1 PE=2 SV=1
Q99N20Breast cancer metastasis-suppressor 1 homolog OS=Mus musculus OX=10090 GN=Brms1 PE=2 SV=1
Q5M7T3Breast cancer metastasis-suppressor 1 homolog OS=Rattus norvegicus OX=10116 GN=Brms1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003628 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08598
all species →		Sds3Sds3-likeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013907
all species →		FamilySds3-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21964
all species →		BREAST CANCER METASTASIS-SUPPRESSOR 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000122
all species →		Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0042826
all species →		Molecular Functionhistone deacetylase bindingInterproscan
GO:0070822
all species →		Cellular ComponentSin3-type complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap13.2480.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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