Detailed information of evm.model.Ap13.2566 in Astrangia poculata

Genomic Location: Ap13:27304579...27321791
NR annotation: XP_027051491.1, sorting nexin-6-like [Pocillopora damicornis]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6P8X1Sorting nexin-6 OS=Mus musculus OX=10090 GN=Snx6 PE=1 SV=2
Q5R613Sorting nexin-6 OS=Pongo abelii OX=9601 GN=SNX6 PE=2 SV=1
Q9UNH7Sorting nexin-6 OS=Homo sapiens OX=9606 GN=SNX6 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006318 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00787
all species →		PXPX domainDomainInterproscan
PF09325
all species →		Vps5Vps5 C terminal likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001683
all species →		DomainPhox homologyInterproscan
IPR027267
all species →		Homologous_superfamilyAH/BAR domain superfamilyInterproscan
IPR014637
all species →		FamilySorting nexin-5/6/32Interproscan
IPR036871
all species →		Homologous_superfamilyPX domain superfamilyInterproscan
IPR015404
all species →		DomainSorting nexin/Vps5-like, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45850
all species →		SORTING NEXIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0035091
all species →		Molecular Functionphosphatidylinositol bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K17920SNX5_6_32; sorting nexin-5/6/32-Domain-containing proteins not elsewhere classifiedko04990deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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