Gene detail

Detailed information of evm.model.Ap13.2602 in Astrangia poculata

Genomic Location: Ap13:27577523...27583812
NR annotation: XP_020619894.1, cytochrome c oxidase assembly protein COX16 homolog, mitochondrial-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9CR63	Cytochrome c oxidase assembly protein COX16 homolog, mitochondrial OS=Mus musculus OX=10090 GN=Cox16 PE=3 SV=1
Q2NKS2	Cytochrome c oxidase assembly protein COX16 homolog, mitochondrial OS=Bos taurus OX=9913 GN=COX16 PE=3 SV=1
Q9P0S2	Cytochrome c oxidase assembly protein COX16 homolog, mitochondrial OS=Homo sapiens OX=9606 GN=COX16 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010066 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14138 all species →	COX16	Cytochrome c oxidase assembly protein COX16	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020164 all species →	Family	Cytochrome c oxidase assembly protein COX16	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR17130 all species →	MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0031966 all species →	Cellular Component	mitochondrial membrane	Interproscan
GO:0031305 all species →	Cellular Component	obsolete integral component of mitochondrial inner membrane	Interproscan
GO:0033617 all species →	Biological Process	mitochondrial cytochrome c oxidase assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18182	COX16; cytochrome c oxidase assembly protein subunit 16	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.