Detailed information of evm.model.Ap13.2849_evm.model.Ap13.2850 in Astrangia poculata

Genomic Location: Ap13:30212437...30242520
NR annotation: RMX38862.1, hypothetical protein pdam_00018045 [Pocillopora damicornis]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P55032Matrilysin (Fragment) OS=Felis catus OX=9685 GN=MMP7 PE=2 SV=1
Q10738Matrilysin OS=Mus musculus OX=10090 GN=Mmp7 PE=1 SV=1
P50280Matrilysin OS=Rattus norvegicus OX=10116 GN=Mmp7 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0046776 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00413
all species →
Peptidase_M10MatrixinDomainInterproscan
PF00045
all species →
HemopexinHemopexinRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018487
all species →
RepeatHemopexin-like repeatsInterproscan
IPR001818
all species →
DomainPeptidase M10, metallopeptidaseInterproscan
IPR036365
all species →
Homologous_superfamilyPGBD-like superfamilyInterproscan
IPR024079
all species →
Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR033739
all species →
DomainPeptidase M10A, catalytic domainInterproscan
IPR036375
all species →
Homologous_superfamilyHemopexin-like domain superfamilyInterproscan
IPR006026
all species →
DomainPeptidase, metallopeptidaseInterproscan
IPR000585
all species →
DomainHemopexin-like domainInterproscan
IPR021190
all species →
FamilyPeptidase M10AInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10201
all species →
MATRIX METALLOPROTEINASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004222
all species →
Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508
all species →
Biological ProcessproteolysisInterproscan
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan
GO:0031012
all species →
Cellular Componentextracellular matrixInterproscan
GO:0008237
all species →
Molecular Functionmetallopeptidase activityInterproscan
GO:0030198
all species →
Biological Processextracellular matrix organizationInterproscan
GO:0030574
all species →
Biological Processcollagen catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap13.2849_evm.model.Ap13.2850.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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