Detailed information of evm.model.Ap13.2893 in Astrangia poculata

Genomic Location: Ap13:30622485...30638628
NR annotation: XP_020618441.1, potassium voltage-gated channel subfamily H member 1-like isoform X2 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q63472Voltage-gated delayed rectifier potassium channel KCNH1 OS=Rattus norvegicus OX=10116 GN=Kcnh1 PE=1 SV=1
Q8NCM2Voltage-gated delayed rectifier potassium channel KCNH5 OS=Homo sapiens OX=9606 GN=KCNH5 PE=1 SV=3
Q920E3Voltage-gated delayed rectifier potassium channel KCNH5 OS=Mus musculus OX=10090 GN=Kcnh5 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002107 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13426
all species →		PAS_9PAS domainDomainInterproscan
PF00027
all species →		cNMP_bindingCyclic nucleotide-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000014
all species →		DomainPAS domainInterproscan
IPR000595
all species →		DomainCyclic nucleotide-binding domainInterproscan
IPR000700
all species →		DomainPAS-associated, C-terminalInterproscan
IPR018490
all species →		Homologous_superfamilyCyclic nucleotide-binding domain superfamilyInterproscan
IPR035965
all species →		Homologous_superfamilyPAS domain superfamilyInterproscan
IPR014710
all species →		Homologous_superfamilyRmlC-like jelly roll foldInterproscan
IPR001610
all species →		RepeatPAC motifInterproscan
IPR050818
all species →		FamilyVoltage-gated potassium channel family HInterproscan
IPR003949
all species →		FamilyPotassium channel, voltage-dependent, EAGInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10217
all species →		VOLTAGE AND LIGAND GATED POTASSIUM CHANNELInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005249
all species →		Molecular Functionvoltage-gated potassium channel activityInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0042391
all species →		Biological Processregulation of membrane potentialInterproscan
GO:0071805
all species →		Biological Processpotassium ion transmembrane transportInterproscan
GO:0006813
all species →		Biological Processpotassium ion transportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap13.2893.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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