Genomic Location: Ap13:31433949...31443003
NR annotation: XP_020603467.1, HHIP-like protein 2 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap13.2979 |
| Transcript |
| evm.model.Ap13.2979 |
| Protein |
| evm.model.Ap13.2979 |
| UniProt accession | Description |
|---|---|
| Q9D2G9 | HHIP-like protein 2 OS=Mus musculus OX=10090 GN=Hhipl2 PE=2 SV=2 |
| Q6UWX4 | HHIP-like protein 2 OS=Homo sapiens OX=9606 GN=HHIPL2 PE=1 SV=1 |
| Q14DK5 | HHIP-like protein 1 OS=Mus musculus OX=10090 GN=Hhipl1 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004417 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03024 all species → | Folate_rec | Folate receptor family | Domain | Interproscan |
| PF07995 all species → | GSDH | Glucose / Sorbosone dehydrogenase | Repeat | Interproscan |
| PF01549 all species → | ShK | ShK domain-like | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR018143 all species → | Domain | Folate receptor-like | Interproscan |
| IPR011042 all species → | Homologous_superfamily | Six-bladed beta-propeller, TolB-like | Interproscan |
| IPR012938 all species → | Domain | Glucose/Sorbosone dehydrogenase | Interproscan |
| IPR003582 all species → | Domain | ShKT domain | Interproscan |
| IPR011041 all species → | Homologous_superfamily | Soluble quinoprotein glucose/sorbosone dehydrogenase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19328 all species → | HEDGEHOG-INTERACTING PROTEIN | Interproscan |
evm.model.Ap13.2979. This gene does have a gene model — the search simply returned no hit.| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K25557 | HHIPL; HHIP-like protein | - | Signaling proteins | - | deepkoala |
Transcript abundance of evm.model.Ap13.2979 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
