Detailed information of evm.model.Ap13.3034 in Astrangia poculata

Genomic Location: Ap13:32056778...32059734
NR annotation: XP_020607097.1, cofilin-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4I963Cofilin OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=COF1 PE=3 SV=2
Q4P6E9Cofilin OS=Mycosarcoma maydis OX=5270 GN=COF1 PE=3 SV=1
P78929Cofilin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cof1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000920 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00241
all species →		Cofilin_ADFCofilin/tropomyosin-type actin-binding proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002108
all species →		DomainActin-depolymerising factor homology domainInterproscan
IPR029006
all species →		Homologous_superfamilyADF-H/Gelsolin-like domain superfamilyInterproscan
IPR017904
all species →		FamilyADF/CofilinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11913
all species →		COFILIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003779
all species →		Molecular Functionactin bindingInterproscan
GO:0015629
all species →		Cellular Componentactin cytoskeletonInterproscan
GO:0030042
all species →		Biological Processactin filament depolymerizationInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0030479
all species →		Cellular Componentactin cortical patchInterproscan
GO:0051014
all species →		Biological Processactin filament severingInterproscan
GO:0051015
all species →		Molecular Functionactin filament bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K05765CFL; cofilin-Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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