Gene detail

Detailed information of evm.model.Ap13.3098 in Astrangia poculata

Genomic Location: Ap13:32744114...32756481
NR annotation: XP_020603442.1, uncharacterized protein LOC110042416 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap13.3098

atgttatatggtgtcaatcgaaagcctttggtttggataccagtgcgtgacggcacacaactggctgctaaactctggatcccagaattagttgaaaaaaatgctgatgtcaagtctacagaggatgaaaaatatcctgctatattagaatttcttccatatcgccgtatggactggacagcccaaagagatgagaaggcccattcatatttttgttcccatggttatgtttgtgtccgtgtggacatgcgaggaactggggactcagagggatttatttatgatgaatgtgaaagacaagagcatgaagatggctgtgatgtcatcagttggatttcacagcaaccctggtgtactggaaatgttggcatgtacgggaaaagctgggcaggatttaatggccttcagatagctgccagacaaccccctgccctgaagactgtcatatctacttattccagtgatgaacggtatttaaatgattgtcattaccgtggtggctgtgtccttgcccgggaaattatgtcatgggctcatgttatgctcctttggaatgcacggcctcctcatccagcaagccttggttcaagatggaaagaagtgtggttagaacgcttcaataaatcatttgaaccctgggtacacaaatggctgtcacatcagacccgtgagccgtactggcagtatgggtccatcgctgaagattacacttccatcaaatgtcctgtatttctgatgggaggattttctgacctgtttaaagatgcagtgtttactatggtggaacatctaaagtgtcccgtccgagcgttaattggtccatggtcccattcatggcctactgactcttcacctgggcctcggatagaccacctaaaagagtgcctcaggtggtgggactgtcatttgaagggcctgcccacgggtgttatggacgaacctgtgttaaggcttttcttgagggatggcattttaaatgcgcacaaagaagacatttggccagggaagtggatagcggaggaccgctggccctcgcccaatgtacaatttcaagaattctgtttgcaaaaggacagagttttgacaatgacatcagagaccccagaccaatcagctatcagcaacgagccggtcactgccaagtcctcttttctaagtggatcatggggtggtgtcccgctcataaacggtcttgaggacctccctgtggaacaaagtttggaagacgctatatcggagtgctgggagacagcaacgcttaaagagcctgttgctgtgttgggatttgctgaagttcatttacagctaagctgtgacaggccctgtgctcagattgtcgccaggctgtgtgatgtgtttcccaatgggaagtcttcacttataacaagaggagtgttaaacttgactcatctcggcggccattcaccaaaggatattcagccactgaagcctcatgaaaacttccaagcgcgggttaaatttgattccactgcctacactgtagccgctggccataaaatacgactggcgctctcctcagtccactggccgtttgtctggccttctccacatgtgtcgtccctctcgatacacaccggaagtaagagtaagctactacttccggttcgagtatcaaatgacgaagtaattgaaaaggatgcgcagctgcgagagcttgtacctcctgattctgaatataagcacgttattttacctgttgagtggcggagaaaaccccagaaggcaagaaccctggagactgatcagttaagtgacgtatacaaattgactctttccactgactgtggatgtgttctactgaaagacacaaacaccctgtatgatgaaacaaacacagaaacgtacacaatcaaagaaggcgagccaaccacagccaaggtcgccatacaaggccagatcgtactgaaggtagaggatgaatctgctgaccaagacgacagtggtcaccaccggtgggatactagagtccaggcttccagcgagatgtggtctgatgaacagttcttctacttgaagactcaattttcagcgtggcataaaagtgaagaatgctttaaaaaaacttggacaaagaaaatagaacgtttttatgtttag

Transcript

evm.model.Ap13.3098

TTTTGGGCGGAGAGACCGCGGATTGAGAAACGACTGTGCAAACCCAATATGTTATATGGTGTCAATCGAAAGCCTTTGGTTTGGATACCAGTGCGTGACGGCACACAACTGGCTGCTAAACTCTGGATCCCAGAATTAGTTGAAAAAAATGCTGATGTCAAGTCTACAGAGGATGAAAAATATCCTGCTATATTAGAATTTCTTCCATATCGCCGTATGGACTGGACAGCCCAAAGAGATGAGAAGGCCCATTCATATTTTTGTTCCCATGGTTATGTTTGTGTCCGTGTGGACATGCGAGGAACTGGGGACTCAGAGGGATTTATTTATGATGAATGTGAAAGACAAGAGCATGAAGATGGCTGTGATGTCATCAGTTGGATTTCACAGCAACCCTGGTGTACTGGAAATGTTGGCATGTACGGGAAAAGCTGGGCAGGATTTAATGGCCTTCAGATAGCTGCCAGACAACCCCCTGCCCTGAAGACTGTCATATCTACTTATTCCAGTGATGAACGGTATTTAAATGATTGTCATTACCGTGGTGGCTGTGTCCTTGCCCGGGAAATTATGTCATGGGCTCATGTTATGCTCCTTTGGAATGCACGGCCTCCTCATCCAGCAAGCCTTGGTTCAAGATGGAAAGAAGTGTGGTTAGAACGCTTCAATAAATCATTTGAACCCTGGGTACACAAATGGCTGTCACATCAGACCCGTGAGCCGTACTGGCAGTATGGGTCCATCGCTGAAGATTACACTTCCATCAAATGTCCTGTATTTCTGATGGGAGGATTTTCTGACCTGTTTAAAGATGCAGTGTTTACTATGGTGGAACATCTAAAGTGTCCCGTCCGAGCGTTAATTGGTCCATGGTCCCATTCATGGCCTACTGACTCTTCACCTGGGCCTCGGATAGACCACCTAAAAGAGTGCCTCAGGTGGTGGGACTGTCATTTGAAGGGCCTGCCCACGGGTGTTATGGACGAACCTGTGTTAAGGCTTTTCTTGAGGGATGGCATTTTAAATGCGCACAAAGAAGACATTTGGCCAGGGAAGTGGATAGCGGAGGACCGCTGGCCCTCGCCCAATGTACAATTTCAAGAATTCTGTTTGCAAAAGGACAGAGTTTTGACAATGACATCAGAGACCCCAGACCAATCAGCTATCAGCAACGAGCCGGTCACTGCCAAGTCCTCTTTTCTAAGTGGATCATGGGGTGGTGTCCCGCTCATAAACGGTCTTGAGGACCTCCCTGTGGAACAAAGTTTGGAAGACGCTATATCGGAGTGCTGGGAGACAGCAACGCTTAAAGAGCCTGTTGCTGTGTTGGGATTTGCTGAAGTTCATTTACAGCTAAGCTGTGACAGGCCCTGTGCTCAGATTGTCGCCAGGCTGTGTGATGTGTTTCCCAATGGGAAGTCTTCACTTATAACAAGAGGAGTGTTAAACTTGACTCATCTCGGCGGCCATTCACCAAAGGATATTCAGCCACTGAAGCCTCATGAAAACTTCCAAGCGCGGGTTAAATTTGATTCCACTGCCTACACTGTAGCCGCTGGCCATAAAATACGACTGGCGCTCTCCTCAGTCCACTGGCCGTTTGTCTGGCCTTCTCCACATGTGTCGTCCCTCTCGATACACACCGGAAGTAAGAGTAAGCTACTACTTCCGGTTCGAGTATCAAATGACGAAGTAATTGAAAAGGATGCGCAGCTGCGAGAGCTTGTACCTCCTGATTCTGAATATAAGCACGTTATTTTACCTGTTGAGTGGCGGAGAAAACCCCAGAAGGCAAGAACCCTGGAGACTGATCAGTTAAGTGACGTATACAAATTGACTCTTTCCACTGACTGTGGATGTGTTCTACTGAAAGACACAAACACCCTGTATGATGAAACAAACACAGAAACGTACACAATCAAAGAAGGCGAGCCAACCACAGCCAAGGTCGCCATACAAGGCCAGATCGTACTGAAGGTAGAGGATGAATCTGCTGACCAAGACGACAGTGGTCACCACCGGTGGGATACTAGAGTCCAGGCTTCCAGCGAGATGTGGTCTGATGAACAGTTCTTCTACTTGAAGACTCAATTTTCAGCGTGGCATAAAAGTGAAGAATGCTTTAAAAAAACTTGGACAAAGAAAATAGAACGTTTTTATGTTTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9L9D7	Cocaine esterase OS=Rhodococcus sp. (strain MB1 Bresler) OX=104109 GN=cocE PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006004 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08530 all species →	PepX_C	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain	Domain	Interproscan
PF02129 all species →	Peptidase_S15	X-Pro dipeptidyl-peptidase (S15 family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050585 all species →	Family	Xaa-Pro dipeptidyl-peptidase/Cocaine esterase	Interproscan
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR013736 all species →	Domain	Xaa-Pro dipeptidyl-peptidase, C-terminal	Interproscan
IPR005674 all species →	Family	CocE/Serine esterase	Interproscan
IPR000383 all species →	Domain	Xaa-Pro dipeptidyl-peptidase-like domain	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43056 all species →	PEPTIDASE S9 PROLYL OLIGOPEPTIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008239 all species →	Molecular Function	dipeptidyl-peptidase activity	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap13.3098.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.