Detailed information of evm.model.Ap13.390 in Astrangia poculata

Genomic Location: Ap13:4057599...4063046
NR annotation: KAJ7379998.1, CST complex subunit STN1 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007414 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09170
all species →		STN1_2CST, complex subunit STN1, C terminalDomainInterproscan
PF10451
all species →		Stn1Telomere regulation protein Stn1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015253
all species →		DomainStn1, C-terminalInterproscan
IPR036390
all species →		Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR042082
all species →		Homologous_superfamilyCST complex subunit Stn1, wHTH1 motif superfamilyInterproscan
IPR018856
all species →		DomainCST complex subunit Stn1, N-terminalInterproscan
IPR012340
all species →		Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR040260
all species →		FamilyReplication factor A protein-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13989
all species →		REPLICATION PROTEIN A-RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap13.390. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K23312STN1; CST complex subunit STN1-DNA replication proteinsko03032deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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