Gene detail

Detailed information of evm.model.Ap13.60 in Astrangia poculata

Genomic Location: Ap13:545626...555999
NR annotation: XP_020627798.1, radial spoke head protein 4 homolog A-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8CDR2	Radial spoke head protein 6 homolog A OS=Mus musculus OX=10090 GN=Rsph6a PE=1 SV=1
Q9H0K4	Radial spoke head protein 6 homolog A OS=Homo sapiens OX=9606 GN=RSPH6A PE=1 SV=1
Q5TD94	Radial spoke head protein 4 homolog A OS=Homo sapiens OX=9606 GN=RSPH4A PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001595 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04712 all species →	Radial_spoke	Radial spokehead-like protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006802 all species →	Family	Radial spokehead-like protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13159 all species →	RADIAL SPOKEHEAD-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0001534 all species →	Cellular Component	radial spoke	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan
GO:0060294 all species →	Biological Process	cilium movement involved in cell motility	Interproscan
GO:0003341 all species →	Biological Process	cilium movement	Interproscan
GO:0005930 all species →	Cellular Component	axoneme	Interproscan
GO:0035082 all species →	Biological Process	axoneme assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19756	RSPH4_6; radial spoke head protein 4/6	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.