Detailed information of evm.model.Ap13.615 in Astrangia poculata

Genomic Location: Ap13:6209675...6214206
NR annotation: KAJ7350982.1, hypothetical protein OS493_037438 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001045 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00088
all species →		TrefoilTrefoil (P-type) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR044913
all species →		Homologous_superfamilyP-type trefoil domain superfamilyInterproscan
IPR017994
all species →		FamilyP-type trefoil, chordataInterproscan
IPR000519
all species →		DomainP-type trefoil domainInterproscan
IPR017957
all species →		Conserved_siteP-type trefoil, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13826
all species →		INTESTINAL TREFOIL FACTOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K22453TFF2; trefoil factor 2-Structural proteins-deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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