Detailed information of evm.model.Ap13.642 in Astrangia poculata

Genomic Location: Ap13:6576361...6579061
NR annotation: KAJ7376519.1, Alpha-ketoglutarate-dependent dioxygenase alkB 6 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6IQE9Probable RNA/DNA demethylase ALKBH6 OS=Danio rerio OX=7955 GN=alkbh6 PE=2 SV=1
Q3KRA9Probable RNA/DNA demethylase ALKBH6 OS=Homo sapiens OX=9606 GN=ALKBH6 PE=1 SV=2
Q8K2U2Probable RNA/DNA demethylase ALKBH6 OS=Mus musculus OX=10090 GN=Alkbh6 PE=2 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006288 (this species only)

 Pfam domain
No Pfam domain signature was detected for evm.model.Ap13.642. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR032862
all species →		FamilyAlpha-ketoglutarate-dependent dioxygenase alkB homologue 6Interproscan
IPR037151
all species →		Homologous_superfamilyAlpha-ketoglutarate-dependent dioxygenase AlkB-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46030
all species →		ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 6Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap13.642.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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