Gene detail

Detailed information of evm.model.Ap13.649_evm.model.Ap13.650 in Astrangia poculata

Genomic Location: Ap13:6650279...6678595
NR annotation: XP_027058166.1, kinesin-like protein KIF6 [Pocillopora damicornis]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap13.649_evm.model.Ap13.650

atggtgaaacaagggattcagatttacgccagggcaaagcctacaaaacaaaagacagggctttatgaagcttatgaagacgagagtggagggtcgtgcattgctttcactgtgccgaaagatctggctgatggatatatcaacaacaaaagagaagtttataaatttaggttcaacaaagtctttgatcaagactgcaagcaagatgaagtttttgaagaagttgcacaaggagttatagacaacgttttgacaggatacaatgggacaatctttgcatatggccagacagggtctggtaagacgtttacaatcacaggtggtgctgagcgatatgttgacagaggattaattccaaggtcactatcatacatctttgaatactttgaaaagcatcctggaacggtattcactgctcatatttcctaccttgagatctacaatgaaaatggttatgatcttttggatcctaaacatgaagccagcaagctggaagatttaccgaaagtgaatctgtttgaagacagtgacaataatgttcacctgaagaatctttctttgcatcaagcaagtaatgaagaagaagctctaaatcttttgtttcttggagatacaaacagaatgattgctgagacacccatgaatcaggcttctaccaggtcacattgtattttcaccatccacatttcaacacgtgatcctggatctgccactatcagacgagccaagcttcacttggtcgatcttgcagggtctgaaagagttggaaagactaatgttggtggaactctcctcacagaagccaagtatattaatttatctctgcactatcttgaacaggtgatagtggcattatcagacaaatcaagaagtcacattccttacagaaattctatgatgacttctgttttaagagacagtcttggaggaaactgtatgaccacaatgatagcaacatgttcccttgaaaagaaaaacttagatgaatcgatttcaacatgtcgatttgcacagagagtggccatgatcaagaatgatgtccttctcaatgaagaaattgatcctaaactgctgattgcacagcttaaagcggaagtacagagacttaaagatgaactggcaatgtccacaggacaggagtacacaggagaactaacagatgatgaaatggacaggctgcgccgaatggtgaaaagttacattgaagacagtgatcctgactcagccctcagtgttggtgcggatatgagaaagatcaactactgctttcaactgctcaagaatcacgtgttggagaagagcaaaagaaaccccactcctcccccacaaagtaggaccccagcaatcgatggcggcctggacagtagctacttaggaaaccacactgaagtgaacaagctgaaagaactcatccgacagagagataacgagattaatatcttggtcggcatgctaaagaaggagaagaagcgcacagctgatctagaggtgtccgtgcgacaaggagggggccgattccaagatgggacgggtgcggcaccagatggcattagacggagcgctagtcagcccctgagtgatgattcagagagtgaactatccaacataagatctacgagtaggacacgagtgaaagacaggccctcctccgatactactgagaatcgctcacaccctcaagctcctaatgatgattccagtaatcacaggccaccatctgcttacagaagaaaactcgatgaaatgtccgttggaagaaaggaagcttttgagactttcaggcgagactatcctcacaatgacacgatagaagagaataaacgaacactaaagcatagatatgcggaagccaaaagactcggagagcaagtaaacacatcacgacaaaaaataaattctataaaaagtcaaatcgaacagcaaagagttcgtcgctcgatgcaaggtttcaataacggcacagaaggaatggaggatgacgaccctgtagaacagaacctaaggcaggctattgaggaggaaaaggcaaactacaaagaaagcttcactcgccttcgaaccctcaagacagaaatagagcaccttcaacacttgttggagaaagccaaggttcagatgcagaaagattttgagatttggtgggcagagcaggcggttttcagccagccaccagatgaagtccgtgcagcgtggaaaacccctccgatatcccccgttcgtccgccatccgcccctcggagacgtgacccagacccgggtggtttatcaaatccccgaggagacgagtcctcccgtagcaccagaccgggaaaatttgtatccaaactacgagccgaagcacaactggcgtcttcaggagtgacgtcatctgtcggccgtccgcctcttcacgggtctagttcagacagtggtctgagtagctggtctacgtctgtagccacagcggcagctgatgatgtaagctcgggacatgcctcacgaagtaaatcaggttccgctagtgacgtcagtagtggttcgggatcagtgaaactgactggggacactcgagctgatgccgacatcttggcttttataaaagcaaggcaaaacttgctacagcaaagaggccatcggtag

Transcript

evm.model.Ap13.649_evm.model.Ap13.650

ATGGTGAAACAAGGGATTCAGATTTACGCCAGGGCAAAGCCTACAAAACAAAAGACAGGGCTTTATGAAGCTTATGAAGACGAGAGTGGAGGGTCGTGCATTGCTTTCACTGTGCCGAAAGATCTGGCTGATGGATATATCAACAACAAAAGAGAAGTTTATAAATTTAGGTTCAACAAAGTCTTTGATCAAGACTGCAAGCAAGATGAAGTTTTTGAAGAAGTTGCACAAGGAGTTATAGACAACGTTTTGACAGGATACAATGGGACAATCTTTGCATATGGCCAGACAGGGTCTGGTAAGACGTTTACAATCACAGGTGGTGCTGAGCGATATGTTGACAGAGGATTAATTCCAAGGTCACTATCATACATCTTTGAATACTTTGAAAAGCATCCTGGAACGGTATTCACTGCTCATATTTCCTACCTTGAGATCTACAATGAAAATGGTTATGATCTTTTGGATCCTAAACATGAAGCCAGCAAGCTGGAAGATTTACCGAAAGTGAATCTGTTTGAAGACAGTGACAATAATGTTCACCTGAAGAATCTTTCTTTGCATCAAGCAAGTAATGAAGAAGAAGCTCTAAATCTTTTGTTTCTTGGAGATACAAACAGAATGATTGCTGAGACACCCATGAATCAGGCTTCTACCAGGTCACATTGTATTTTCACCATCCACATTTCAACACGTGATCCTGGATCTGCCACTATCAGACGAGCCAAGCTTCACTTGGTCGATCTTGCAGGGTCTGAAAGAGTTGGAAAGACTAATGTTGGTGGAACTCTCCTCACAGAAGCCAAGTATATTAATTTATCTCTGCACTATCTTGAACAGGTGATAGTGGCATTATCAGACAAATCAAGAAGTCACATTCCTTACAGAAATTCTATGATGACTTCTGTTTTAAGAGACAGTCTTGGAGGAAACTGTATGACCACAATGATAGCAACATGTTCCCTTGAAAAGAAAAACTTAGATGAATCGATTTCAACATGTCGATTTGCACAGAGAGTGGCCATGATCAAGAATGATGTCCTTCTCAATGAAGAAATTGATCCTAAACTGCTGATTGCACAGCTTAAAGCGGAAGTACAGAGACTTAAAGATGAACTGGCAATGTCCACAGGACAGGAGTACACAGGAGAACTAACAGATGATGAAATGGACAGGCTGCGCCGAATGGTGAAAAGTTACATTGAAGACAGTGATCCTGACTCAGCCCTCAGTGTTGGTGCGGATATGAGAAAGATCAACTACTGCTTTCAACTGCTCAAGAATCACGTGTTGGAGAAGAGCAAAAGAAACCCCACTCCTCCCCCACAAAGTAGGACCCCAGCAATCGATGGCGGCCTGGACAGTAGCTACTTAGGAAACCACACTGAAGTGAACAAGCTGAAAGAACTCATCCGACAGAGAGATAACGAGATTAATATCTTGGTCGGCATGCTAAAGAAGGAGAAGAAGCGCACAGCTGATCTAGAGGTGTCCGTGCGACAAGGAGGGGGCCGATTCCAAGATGGGACGGGTGCGGCACCAGATGGCATTAGACGGAGCGCTAGTCAGCCCCTGAGTGATGATTCAGAGAGTGAACTATCCAACATAAGATCTACGAGTAGGACACGAGTGAAAGACAGGCCCTCCTCCGATACTACTGAGAATCGCTCACACCCTCAAGCTCCTAATGATGATTCCAGTAATCACAGGCCACCATCTGCTTACAGAAGAAAACTCGATGAAATGTCCGTTGGAAGAAAGGAAGCTTTTGAGACTTTCAGGCGAGACTATCCTCACAATGACACGATAGAAGAGAATAAACGAACACTAAAGCATAGATATGCGGAAGCCAAAAGACTCGGAGAGCAAGTAAACACATCACGACAAAAAATAAATTCTATAAAAAGTCAAATCGAACAGCAAAGAGTTCGTCGCTCGATGCAAGGTTTCAATAACGGCACAGAAGGAATGGAGGATGACGACCCTGTAGAACAGAACCTAAGGCAGGCTATTGAGGAGGAAAAGGCAAACTACAAAGAAAGCTTCACTCGCCTTCGAACCCTCAAGACAGAAATAGAGCACCTTCAACACTTGTTGGAGAAAGCCAAGGTTCAGATGCAGAAAGATTTTGAGATTTGGTGGGCAGAGCAGGCGGTTTTCAGCCAGCCACCAGATGAAGTCCGTGCAGCGTGGAAAACCCCTCCGATATCCCCCGTTCGTCCGCCATCCGCCCCTCGGAGACGTGACCCAGACCCGGGTGGTTTATCAAATCCCCGAGGAGACGAGTCCTCCCGTAGCACCAGACCGGGAAAATTTGTATCCAAACTACGAGCCGAAGCACAACTGGCGTCTTCAGGAGTGACGTCATCTGTCGGCCGTCCGCCTCTTCACGGGTCTAGTTCAGACAGTGGTCTGAGTAGCTGGTCTACGTCTGTAGCCACAGCGGCAGCTGATGATGTAAGCTCGGGACATGCCTCACGAAGTAAATCAGGTTCCGCTAGTGACGTCAGTAGTGGTTCGGGATCAGTGAAACTGACTGGGGACACTCGAGCTGATGCCGACATCTTGGCTTTTATAAAAGCAAGGCAAAACTTGCTACAGCAAAGAGGCCATCGGTAGCACCTGGTCCTTACATCAGTGGAACCAACATGAGACACAAGAGGACGGCCCTCTACGCCGACCCCACCCGCCAAACGAGCCGCCCAAGCACCATAAAGGAACCAGACACCAACCAGTATCACATATATATCAGGGAAGAAGAATAAAAAAGGAAACGCTTTGTTCGACAAGTTCTCAGTACACATATGAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6ZMV9	Kinesin-like protein KIF6 OS=Homo sapiens OX=9606 GN=KIF6 PE=1 SV=3
P46870	Kinesin-like protein KLP1 OS=Chlamydomonas reinhardtii OX=3055 GN=KLP1 PE=2 SV=1
Q9WV04	Kinesin-like protein KIF9 OS=Mus musculus OX=10090 GN=Kif9 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001662 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225 all species →	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036961 all species →	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR001752 all species →	Domain	Kinesin motor domain	Interproscan
IPR027640 all species →	Family	Kinesin-like protein	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR019821 all species →	Conserved_site	Kinesin motor domain, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24115 all species →	KINESIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003777 all species →	Molecular Function	microtubule motor activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0007018 all species →	Biological Process	microtubule-based movement	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0005871 all species →	Cellular Component	kinesin complex	Interproscan
GO:0005874 all species →	Cellular Component	microtubule	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10397	KIF6_9; kinesin family member 6/9	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.