Genomic Location: Ap13:8699151...8703348
NR annotation: KAJ7379866.1, hypothetical protein OS493_012619, partial [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap13.842 |
| Transcript |
| evm.model.Ap13.842 |
| Protein |
| evm.model.Ap13.842 |
| UniProt accession | Description |
|---|---|
| Q4Z8K6 | Ran-binding proteins 9/10 homolog OS=Drosophila melanogaster OX=7227 GN=RanBPM PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000221 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00622 all species → | SPRY | SPRY domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR044736 all species → | Domain | Ran-binding protein Vid30/RanBPM/SPLA, SPRY domain | Interproscan |
| IPR003877 all species → | Domain | SPRY domain | Interproscan |
| IPR043136 all species → | Homologous_superfamily | B30.2/SPRY domain superfamily | Interproscan |
| IPR027267 all species → | Homologous_superfamily | AH/BAR domain superfamily | Interproscan |
| IPR013320 all species → | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR050618 all species → | Family | Ubiquitination and Signaling Pathway Regulator | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12864 all species → | RAN BINDING PROTEIN 9-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K01154 | hsdS; type I restriction enzyme, S subunit | EC:3.1.21.3 | Prokaryotic defense system | ko02048 | deepkoala |
Transcript abundance of evm.model.Ap13.842 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
