Detailed information of evm.model.Ap13.884 in Astrangia poculata

Genomic Location: Ap13:9002073...9072569
NR annotation: XP_027044141.1, lysosomal-trafficking regulator-like [Pocillopora damicornis]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q99698Lysosomal-trafficking regulator OS=Homo sapiens OX=9606 GN=LYST PE=1 SV=3
P97412Lysosomal-trafficking regulator OS=Mus musculus OX=10090 GN=Lyst PE=1 SV=1
Q9TTK4Lysosomal-trafficking regulator OS=Bos taurus OX=9913 GN=LYST PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002273 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02138
all species →		BeachBeige/BEACH domainFamilyInterproscan
PF14844
all species →		PH_BEACHPH domain associated with Beige/BEACHDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000409
all species →		DomainBEACH domainInterproscan
IPR036372
all species →		Homologous_superfamilyBEACH domain superfamilyInterproscan
IPR050865
all species →		FamilyBEACH Domain-ContainingInterproscan
IPR023362
all species →		DomainPH-BEACH domainInterproscan
IPR011993
all species →		Homologous_superfamilyPH-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13743
all species →		BEIGE/BEACH-RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap13.884. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap13.884.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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