Detailed information of evm.model.Ap13.907 in Astrangia poculata

Genomic Location: Ap13:9484269...9485420
NR annotation: KAJ7384723.1, hypothetical protein OS493_020309 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5R868GPI-N-acetylgalactosamine transferase PGAP4 OS=Pongo abelii OX=9601 GN=PGAP4 PE=2 SV=1
Q9BRR3GPI-N-acetylgalactosamine transferase PGAP4 OS=Homo sapiens OX=9606 GN=PGAP4 PE=1 SV=1
Q91YV9GPI-N-acetylgalactosamine transferase PGAP4 OS=Mus musculus OX=10090 GN=Pgap4 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004356 (this species only)

 Pfam domain
No Pfam domain signature was detected for evm.model.Ap13.907. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR029675
all species →		FamilyGPI-GalNAc transferase PGAP4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31410
all species →		TRANSMEMBRANE PROTEIN 246Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000139
all species →		Cellular ComponentGolgi membraneInterproscan
GO:0006506
all species →		Biological ProcessGPI anchor biosynthetic processInterproscan
GO:0016757
all species →		Molecular Functionglycosyltransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap13.907.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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