Gene detail

Detailed information of evm.model.Ap13.923 in Astrangia poculata

Genomic Location: Ap13:9605197...9626260
NR annotation: CAH3145220.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap13.923

atggcttcggtcaaggtagctgtcagagtgaggccccttaataaaagggagcgtgatatgacagcaaaagtttgtattcatatggacggaaagaagacaacaatctccaatcctactggcgaagataaagatttttcatacgatttttcctactggtctgctgatagttcagacaaacattttgcctcacaagagcaggtgtttgacgatttgggaactgacgtcctccaggcagcatttgaaggttacaatgcatgcattttcgcttatggacagacaggtgctggcaaatcatacagtatgatgggacaagagtctgcccctgggctgataccaagaatatgccagggtctgtatacacgcatggaatccagcgctgatgataagactgagtttaggactgaagtcagttatcttgaaatatacaacgagaaagttggtgatcttctgcggccagccaaaggaagagagaaattcaatctcaaagtgcgtgaacaccccaaggaaggtccttatgtacaagatttgacaaagcatgttgtgaaagactatgaagggatagagagtttaatggacgagggaaacacaaacaggactgtggcctccactaacatgaatgatgtgagcagcagatcacatgcgatcttcaccattttatttacacaggctaaattctatacagacatgccgagtgaaactgtcagtaaaatccaccttgttgacttggcaggaagtgagagagcaaactcaactggtgctacaggaagcagattaaaagaaggagcaaacatcaacaagtctcttgtcacattaggaacagttatctcagcattagctgaagcaagtgaaaattccatccataagcatgatgctaagaagaagctgtttataccatatcgcaactctgtcttgacgtggctgctcaaagacagtttaggaggaaatgctaagacaatcatgatagcagctatatcaccagctgatgtgaactattcagagactctcagtaccctgcgatacgctaacagagcaaagaatatcatcaataaacccacagtcaatgaggatcctaatgtgaagcttatcagagaattgagagctgagatagatcgactcaaagttctcctgcaggcgcatggtcaggatggagttggggggcttggtgctgctgaagaatcgcagataaatgaaagactgcaccagaatgaagcacgagttgaagaacttactaagaactggactagcaagtggcgggagacccagaaaataatcgaggaaagagctcttggctttagatatgagggtgctggcataaaaatggagtcggaactgcctcacttggtctgcattgatgatgacgtgctcagtacaggagtgacgctatatcatttgaaggatggaatgacatacatcggaagagaggatgccaactttaactctgatatagtgttatcagggcctggtattgaagctgaacattgcatcgtggagagtatcgagggaactgttatcctgcatcccatcgcctccctgtgtcaggtgaatgggctccctgtgggcaagtcacagcggatcagtcagggagatgttattttacttggaaagacaaacatgctacggttcaaccatccccaagaggctgcaaagctcaggaaaaagagatattatgaatcgatggaaaatctggcggatattggatcagaaccagagagggaaccgtcctatatgttttacaaacctggtttggagctggagcgccagtatcgcgaggagacacgaaggattgaagagcaaaggcgatgccttgaaactcaacagcgagaagctgccgacaaactggaggaagctagacgcgagcttgagtttcttcgctctcagcaacagagagcgtccgaagttcgcagcgcggaggaagttgaacgaagaaaggaactggaagcgagtcatcagcagctggaacttcagaagaaatacttggagggaatacgagaagaacaagaaaatgctcgccaacgagctgaggacgaaatacgacaggtaaaggaaaggattcgtcaagaacaggaagaagagaagcagcgactggaagctgaaatgcagcgcttgatggcgctggaggaagatcacaggaagaaggttcagctcaaggaacaggagatgggtaggattaaagaagatctggagaagaagtgggaccgagaacgacgacaggttgaagtgcagcgggaagaggtagcaaaactacagcaggaaattgaagccaaatcacaagaactagaattagctgaacagcaggctcgtgccactgccgaacgaagcagtactgcgtcttcttccgcgacagtcagcccttccgttagcaatgacatgctgcagtcggctgctgaacggagtgaggcggcagctgaagctgcagccgaggcagcagctagggccgagcccgaggaaaagtcacaactggatgtcctccgtgagcgactgaagcaactggaaagtgattatgaggaccagcgaaaggaggcgcagagggaagtgtcccaagccaaggagtcggtccgacgagtagagcaggagaccttggaaggactccgcagcctgaccactgggaagtcagctatagaaggggagtggcgccggttggaggaggtgcagaacaaacacaagcgagctcaagaccaggcctacgccaagattagggacgtgcgggagatgttggagaatgcggaggaggtggaggaagcgtcgctcatcgagaaggagaaaatgatcatggagagaagagctgcaagaatgaaagtggaggaggcgaggcgaaggttggaagaattggaaaacgaggataaagaaggtgagctgactgaagctgatttcacgaaaaagaaagaactactagaatttgaaactcgcgaggagatcaaggatatcagagaggaacgaaaaatcttgtcggaactcttgaataaacaccaaacggcgcttcagaaggctacgctgatggtgacagagacgaaaaccaagcttgagaaacacctggagggcgagaagatgattcttatgccgcttagagagaaagttgagagtacggtgcggaatgaactgggaccgctgattcagtatgaacaggagattgagaggaggtgcgaagatgtagaccgcgaggctagagagcgcaagaagctcatttacaaacagcggcggcggattgcgttgctggaacgacagcacagccaggcgctgcagcaggcggagaaagagacgttgaacgaagaagagttagaggagttggagaatgaaagagaagcggaacgaagcttgatcaggaaagagaaggttcgactgcttgaactggagaagaagcacaaggaacaacaagaagtggccgagctgacgatcggcgaagctgtgcaggagctagagaaacgcaaatcaagcgttaatcagctgctagatagtgagcgaagaaagctgtctgatctagaagctgtccataaggagacgctggagcacgtggaacaagaattagagcagcgctcggagattctgcacagagtaaaagataaggtgcagaaggacaaacgacagcttgctaagcttgacgtgcggcagcagcgctgcgcggctaaagctgctgaggaattattcctcatggcggacttgctggagaaagaaatgagcgataaaggaaaaacagacgagcttatcaggattaaagaacagaggaaaaaactacaggagttggacaaacagttgagaatggcggagaagcgagagagaggctcacgcggggacgacgagcagaacccgcaatgcattctgctgtag

Transcript

evm.model.Ap13.923

ATGGCTTCGGTCAAGGTAGCTGTCAGAGTGAGGCCCCTTAATAAAAGGGAGCGTGATATGACAGCAAAAGTTTGTATTCATATGGACGGAAAGAAGACAACAATCTCCAATCCTACTGGCGAAGATAAAGATTTTTCATACGATTTTTCCTACTGGTCTGCTGATAGTTCAGACAAACATTTTGCCTCACAAGAGCAGGTGTTTGACGATTTGGGAACTGACGTCCTCCAGGCAGCATTTGAAGGTTACAATGCATGCATTTTCGCTTATGGACAGACAGGTGCTGGCAAATCATACAGTATGATGGGACAAGAGTCTGCCCCTGGGCTGATACCAAGAATATGCCAGGGTCTGTATACACGCATGGAATCCAGCGCTGATGATAAGACTGAGTTTAGGACTGAAGTCAGTTATCTTGAAATATACAACGAGAAAGTTGGTGATCTTCTGCGGCCAGCCAAAGGAAGAGAGAAATTCAATCTCAAAGTGCGTGAACACCCCAAGGAAGGTCCTTATGTACAAGATTTGACAAAGCATGTTGTGAAAGACTATGAAGGGATAGAGAGTTTAATGGACGAGGGAAACACAAACAGGACTGTGGCCTCCACTAACATGAATGATGTGAGCAGCAGATCACATGCGATCTTCACCATTTTATTTACACAGGCTAAATTCTATACAGACATGCCGAGTGAAACTGTCAGTAAAATCCACCTTGTTGACTTGGCAGGAAGTGAGAGAGCAAACTCAACTGGTGCTACAGGAAGCAGATTAAAAGAAGGAGCAAACATCAACAAGTCTCTTGTCACATTAGGAACAGTTATCTCAGCATTAGCTGAAGCAAGTGAAAATTCCATCCATAAGCATGATGCTAAGAAGAAGCTGTTTATACCATATCGCAACTCTGTCTTGACGTGGCTGCTCAAAGACAGTTTAGGAGGAAATGCTAAGACAATCATGATAGCAGCTATATCACCAGCTGATGTGAACTATTCAGAGACTCTCAGTACCCTGCGATACGCTAACAGAGCAAAGAATATCATCAATAAACCCACAGTCAATGAGGATCCTAATGTGAAGCTTATCAGAGAATTGAGAGCTGAGATAGATCGACTCAAAGTTCTCCTGCAGGCGCATGGTCAGGATGGAGTTGGGGGGCTTGGTGCTGCTGAAGAATCGCAGATAAATGAAAGACTGCACCAGAATGAAGCACGAGTTGAAGAACTTACTAAGAACTGGACTAGCAAGTGGCGGGAGACCCAGAAAATAATCGAGGAAAGAGCTCTTGGCTTTAGATATGAGGGTGCTGGCATAAAAATGGAGTCGGAACTGCCTCACTTGGTCTGCATTGATGATGACGTGCTCAGTACAGGAGTGACGCTATATCATTTGAAGGATGGAATGACATACATCGGAAGAGAGGATGCCAACTTTAACTCTGATATAGTGTTATCAGGGCCTGGTATTGAAGCTGAACATTGCATCGTGGAGAGTATCGAGGGAACTGTTATCCTGCATCCCATCGCCTCCCTGTGTCAGGTGAATGGGCTCCCTGTGGGCAAGTCACAGCGGATCAGTCAGGGAGATGTTATTTTACTTGGAAAGACAAACATGCTACGGTTCAACCATCCCCAAGAGGCTGCAAAGCTCAGGAAAAAGAGATATTATGAATCGATGGAAAATCTGGCGGATATTGGATCAGAACCAGAGAGGGAACCGTCCTATATGTTTTACAAACCTGGTTTGGAGCTGGAGCGCCAGTATCGCGAGGAGACACGAAGGATTGAAGAGCAAAGGCGATGCCTTGAAACTCAACAGCGAGAAGCTGCCGACAAACTGGAGGAAGCTAGACGCGAGCTTGAGTTTCTTCGCTCTCAGCAACAGAGAGCGTCCGAAGTTCGCAGCGCGGAGGAAGTTGAACGAAGAAAGGAACTGGAAGCGAGTCATCAGCAGCTGGAACTTCAGAAGAAATACTTGGAGGGAATACGAGAAGAACAAGAAAATGCTCGCCAACGAGCTGAGGACGAAATACGACAGGTAAAGGAAAGGATTCGTCAAGAACAGGAAGAAGAGAAGCAGCGACTGGAAGCTGAAATGCAGCGCTTGATGGCGCTGGAGGAAGATCACAGGAAGAAGGTTCAGCTCAAGGAACAGGAGATGGGTAGGATTAAAGAAGATCTGGAGAAGAAGTGGGACCGAGAACGACGACAGGTTGAAGTGCAGCGGGAAGAGGTAGCAAAACTACAGCAGGAAATTGAAGCCAAATCACAAGAACTAGAATTAGCTGAACAGCAGGCTCGTGCCACTGCCGAACGAAGCAGTACTGCGTCTTCTTCCGCGACAGTCAGCCCTTCCGTTAGCAATGACATGCTGCAGTCGGCTGCTGAACGGAGTGAGGCGGCAGCTGAAGCTGCAGCCGAGGCAGCAGCTAGGGCCGAGCCCGAGGAAAAGTCACAACTGGATGTCCTCCGTGAGCGACTGAAGCAACTGGAAAGTGATTATGAGGACCAGCGAAAGGAGGCGCAGAGGGAAGTGTCCCAAGCCAAGGAGTCGGTCCGACGAGTAGAGCAGGAGACCTTGGAAGGACTCCGCAGCCTGACCACTGGGAAGTCAGCTATAGAAGGGGAGTGGCGCCGGTTGGAGGAGGTGCAGAACAAACACAAGCGAGCTCAAGACCAGGCCTACGCCAAGATTAGGGACGTGCGGGAGATGTTGGAGAATGCGGAGGAGGTGGAGGAAGCGTCGCTCATCGAGAAGGAGAAAATGATCATGGAGAGAAGAGCTGCAAGAATGAAAGTGGAGGAGGCGAGGCGAAGGTTGGAAGAATTGGAAAACGAGGATAAAGAAGGTGAGCTGACTGAAGCTGATTTCACGAAAAAGAAAGAACTACTAGAATTTGAAACTCGCGAGGAGATCAAGGATATCAGAGAGGAACGAAAAATCTTGTCGGAACTCTTGAATAAACACCAAACGGCGCTTCAGAAGGCTACGCTGATGGTGACAGAGACGAAAACCAAGCTTGAGAAACACCTGGAGGGCGAGAAGATGATTCTTATGCCGCTTAGAGAGAAAGTTGAGAGTACGGTGCGGAATGAACTGGGACCGCTGATTCAGTATGAACAGGAGATTGAGAGGAGGTGCGAAGATGTAGACCGCGAGGCTAGAGAGCGCAAGAAGCTCATTTACAAACAGCGGCGGCGGATTGCGTTGCTGGAACGACAGCACAGCCAGGCGCTGCAGCAGGCGGAGAAAGAGACGTTGAACGAAGAAGAGTTAGAGGAGTTGGAGAATGAAAGAGAAGCGGAACGAAGCTTGATCAGGAAAGAGAAGGTTCGACTGCTTGAACTGGAGAAGAAGCACAAGGAACAACAAGAAGTGGCCGAGCTGACGATCGGCGAAGCTGTGCAGGAGCTAGAGAAACGCAAATCAAGCGTTAATCAGCTGCTAGATAGTGAGCGAAGAAAGCTGTCTGATCTAGAAGCTGTCCATAAGGAGACGCTGGAGCACGTGGAACAAGAATTAGAGCAGCGCTCGGAGATTCTGCACAGAGTAAAAGATAAGGTGCAGAAGGACAAACGACAGCTTGCTAAGCTTGACGTGCGGCAGCAGCGCTGCGCGGCTAAAGCTGCTGAGGAATTATTCCTCATGGCGGACTTGCTGGAGAAAGAAATGAGCGATAAAGGAAAAACAGACGAGCTTATCAGGATTAAAGAACAGAGGAAAAAACTACAGGAGTTGGACAAACAGTTGAGAATGGCGGAGAAGCGAGAGAGAGGCTCACGCGGGGACGACGAGCAGAACCCGCAATGCATTCTGCTGTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96L93	Kinesin-like protein KIF16B OS=Homo sapiens OX=9606 GN=KIF16B PE=1 SV=2
B1AVY7	Kinesin-like protein KIF16B OS=Mus musculus OX=10090 GN=Kif16b PE=1 SV=1
Q9VB25	Kinesin-like protein Klp98A OS=Drosophila melanogaster OX=7227 GN=Klp98A PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000916 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00498 all species →	FHA	FHA domain	Family	Interproscan
PF00225 all species →	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036961 all species →	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR019821 all species →	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR001752 all species →	Domain	Kinesin motor domain	Interproscan
IPR000253 all species →	Domain	Forkhead-associated (FHA) domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR008984 all species →	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47117 all species →	STAR-RELATED LIPID TRANSFER PROTEIN 9	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003777 all species →	Molecular Function	microtubule motor activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0007018 all species →	Biological Process	microtubule-based movement	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17916	KIF16B, SNX23; kinesin family member 16B	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.