Gene detail

Detailed information of evm.model.Ap14.1036 in Astrangia poculata

Genomic Location: Ap14:11183444...11213401
NR annotation: XP_020606636.1, dual specificity testis-specific protein kinase 1-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap14.1036

atgcacaagacagcgttttggaggcccaatcaagacgaatttgcgacaaagcaagttcaaaaagagggaatgaacaaagctccaccaaaagctgagcttaaaatgccagggcctgggcccaagaggccgccattctcctgggaggagatttgcatgtatctgtacggacacacaccagtggagcccgcagtccttgatgatcagcgtaaacgcatcaagcaagaggaaaatggtccagaacgcaagaaaaagcggtgctcgcagccaagtccatcgttggtgttcccggatgaggtgaaactctgtaggtcgagtgtccctggggcagaatttggagtgtgtgcggctcaccccattcctcccgggacgtggatcggtccgtatgaaggccaggttgtaggacgagatgaattacgagagggagcacacaatagctacatgtgggagatttacaaagacggaaagttcagtcattttattgacggtagtgaggagtatatgtcaagctggatgaggtttatacagtgtgcccgctacaaagaggaacagaatatgacagtgtttcagtattgtgggaacatttattaccgggcctttaggcacatcccggcgggccgggagctcctggtctggtacgatgaaaagtactcagaatttatcgatgtcccggcattgatgaaagctaggattgtcagggaacacacagttcaatggaagcccccaggagtcgatgaagaacttcttttcgaagattcacaagatcaggactttgatgaccctgacaggccaatggacccttttgaattggggctgaaggatcacggagagccccatatttggagatgtggtcagtgctcacagacgttttctcaaagggtgcttcttcagatgcatgtgtgcccacagtctcctgatcgaccataccagtgcgggcactgtccttcatcgtttccaggcccagccgagctacgagaacatgtagtgatccacatcaacgagaaaccatttaaatgcgctaaaggggatggcgacgagggtcgtatttttgatgaccccgggtccggagaagaggagtcgattagaattgatcccagcttgttggagggcataccttcgtcgattcccacttcgtgtatttaccgctaccaggattttacatgcactcaacttgctgacgggttttatgggaatgtttataaggttcaacatcgcgaaacgaaggaagttatggttttaaaaatgaacaaacctgatgtggaaagagatacgtgtacaatgctagacgaaatcaagttaatgagtcatctttcacacgagaatgtgataagatttcttgggatttgcgtagatgacagcagagttcatcttctctgcgagttcgtcaatggaggggaccttgaaagtcttttattaaaacattcggtacaactagattggacaacgcgactttatcttgcacgggatatcgccgagggaatgaggtatcttcacaaaaatggcgttattcaccgagatctaacatcgaaaaattgtttgataaaggaaagaaacggctggcgttatggagtcgttgcggatttgggcttagcgacggaaatcaaggaacagtcaattgtggggtctccatataacatggccccagaactgctacgaggagagaattatgatgagaaggctgatgtattttcttatggaataattttatgtgaaatcattggcagggttccagctgacccagatgagttgcctcggacaaactcatttggtctggatgtggagaagtttcagcacatgacaggagactgtccatacgagtttcttcagactgcactgtgttgttgccagatggagccgtcctcccgaccaacatttgttgaaaccgccaaacacttggaatacattcttgtaggaactaaaccttttagacctgacgtagatcaagcgatacacgcactgcctcccaaaacgccacaatcaacagaacagagcatatgtcaactcaccaagaacaataaacatgaaatagaccctgaacaagacaacaatgaaggtgcaaaggacattaaaacctcacctacgctggtacctccggccattattgtaagtacggatgcgtcccctgggatggttcgatcagccgagaagagacgccagtcttggatagcagggcgatataaactgtttaacacggcgaccgatgatttgctcagcaacactccaagtaaattgaaaagtttctttcatcgggttcttcgcgtacaaactcactttgacccgtcaaagcagaagaaactcagagacagtggtaaacatagatcagcttcgcagctgaaaagctataatgtgatcacctcccaagacgagggggatgaagtgacttttgttaagaatctggaagaggcaggttcgggtgcaccgaatccaagctccacagattcacgtggatttcttcgaaggaaaagctcggaacgggatcttccatcagatgcggggtcacaagaagattccgtagacggcaacatttcccctctgagcccccactctggaagtcctctttctcaaactttgcccttaacacctgaccaagccacatctccgaagttgcttgatgtatctcagtcgtgtcacagtccacaaaatcacggcgagtcccacacgccgatgtctaaactgtcagataattcaaacagaccgcgatgtaagtcgacacccgtgtgtaatgacttgagtgctgggcagttatcgagacgcactgcgtctcacagagaatgtgaaatgaacaaagctgttcattcaccgcctgacgtacacgatgaaacgagaaaaatcaagaataggaagtcgccattctggtttctaagaagaaaaggaagcaagtgcaaagattttgagtaa

Transcript

evm.model.Ap14.1036

ATGCACAAGACAGCGTTTTGGAGGCCCAATCAAGACGAATTTGCGACAAAGCAAGTTCAAAAAGAGGGAATGAACAAAGCTCCACCAAAAGCTGAGCTTAAAATGCCAGGGCCTGGGCCCAAGAGGCCGCCATTCTCCTGGGAGGAGATTTGCATGTATCTGTACGGACACACACCAGTGGAGCCCGCAGTCCTTGATGATCAGCGTAAACGCATCAAGCAAGAGGAAAATGGTCCAGAACGCAAGAAAAAGCGGTGCTCGCAGCCAAGTCCATCGTTGGTGTTCCCGGATGAGGTGAAACTCTGTAGGTCGAGTGTCCCTGGGGCAGAATTTGGAGTGTGTGCGGCTCACCCCATTCCTCCCGGGACGTGGATCGGTCCGTATGAAGGCCAGGTTGTAGGACGAGATGAATTACGAGAGGGAGCACACAATAGCTACATGTGGGAGATTTACAAAGACGGAAAGTTCAGTCATTTTATTGACGGTAGTGAGGAGTATATGTCAAGCTGGATGAGGTTTATACAGTGTGCCCGCTACAAAGAGGAACAGAATATGACAGTGTTTCAGTATTGTGGGAACATTTATTACCGGGCCTTTAGGCACATCCCGGCGGGCCGGGAGCTCCTGGTCTGGTACGATGAAAAGTACTCAGAATTTATCGATGTCCCGGCATTGATGAAAGCTAGGATTGTCAGGGAACACACAGTTCAATGGAAGCCCCCAGGAGTCGATGAAGAACTTCTTTTCGAAGATTCACAAGATCAGGACTTTGATGACCCTGACAGGCCAATGGACCCTTTTGAATTGGGGCTGAAGGATCACGGAGAGCCCCATATTTGGAGATGTGGTCAGTGCTCACAGACGTTTTCTCAAAGGGTGCTTCTTCAGATGCATGTGTGCCCACAGTCTCCTGATCGACCATACCAGTGCGGGCACTGTCCTTCATCGTTTCCAGGCCCAGCCGAGCTACGAGAACATGTAGTGATCCACATCAACGAGAAACCATTTAAATGCGCTAAAGGGGATGGCGACGAGGGTCGTATTTTTGATGACCCCGGGTCCGGAGAAGAGGAGTCGATTAGAATTGATCCCAGCTTGTTGGAGGGCATACCTTCGTCGATTCCCACTTCGTGTATTTACCGCTACCAGGATTTTACATGCACTCAACTTGCTGACGGGTTTTATGGGAATGTTTATAAGGTTCAACATCGCGAAACGAAGGAAGTTATGGTTTTAAAAATGAACAAACCTGATGTGGAAAGAGATACGTGTACAATGCTAGACGAAATCAAGTTAATGAGTCATCTTTCACACGAGAATGTGATAAGATTTCTTGGGATTTGCGTAGATGACAGCAGAGTTCATCTTCTCTGCGAGTTCGTCAATGGAGGGGACCTTGAAAGTCTTTTATTAAAACATTCGGTACAACTAGATTGGACAACGCGACTTTATCTTGCACGGGATATCGCCGAGGGAATGAGGTATCTTCACAAAAATGGCGTTATTCACCGAGATCTAACATCGAAAAATTGTTTGATAAAGGAAAGAAACGGCTGGCGTTATGGAGTCGTTGCGGATTTGGGCTTAGCGACGGAAATCAAGGAACAGTCAATTGTGGGGTCTCCATATAACATGGCCCCAGAACTGCTACGAGGAGAGAATTATGATGAGAAGGCTGATGTATTTTCTTATGGAATAATTTTATGTGAAATCATTGGCAGGGTTCCAGCTGACCCAGATGAGTTGCCTCGGACAAACTCATTTGGTCTGGATGTGGAGAAGTTTCAGCACATGACAGGAGACTGTCCATACGAGTTTCTTCAGACTGCACTGTGTTGTTGCCAGATGGAGCCGTCCTCCCGACCAACATTTGTTGAAACCGCCAAACACTTGGAATACATTCTTGTAGGAACTAAACCTTTTAGACCTGACGTAGATCAAGCGATACACGCACTGCCTCCCAAAACGCCACAATCAACAGAACAGAGCATATGTCAACTCACCAAGAACAATAAACATGAAATAGACCCTGAACAAGACAACAATGAAGGTGCAAAGGACATTAAAACCTCACCTACGCTGGTACCTCCGGCCATTATTGTAAGTACGGATGCGTCCCCTGGGATGGTTCGATCAGCCGAGAAGAGACGCCAGTCTTGGATAGCAGGGCGATATAAACTGTTTAACACGGCGACCGATGATTTGCTCAGCAACACTCCAAGTAAATTGAAAAGTTTCTTTCATCGGGTTCTTCGCGTACAAACTCACTTTGACCCGTCAAAGCAGAAGAAACTCAGAGACAGTGGTAAACATAGATCAGCTTCGCAGCTGAAAAGCTATAATGTGATCACCTCCCAAGACGAGGGGGATGAAGTGACTTTTGTTAAGAATCTGGAAGAGGCAGGTTCGGGTGCACCGAATCCAAGCTCCACAGATTCACGTGGATTTCTTCGAAGGAAAAGCTCGGAACGGGATCTTCCATCAGATGCGGGGTCACAAGAAGATTCCGTAGACGGCAACATTTCCCCTCTGAGCCCCCACTCTGGAAGTCCTCTTTCTCAAACTTTGCCCTTAACACCTGACCAAGCCACATCTCCGAAGTTGCTTGATGTATCTCAGTCGTGTCACAGTCCACAAAATCACGGCGAGTCCCACACGCCGATGTCTAAACTGTCAGATAATTCAAACAGACCGCGATGTAAGTCGACACCCGTGTGTAATGACTTGAGTGCTGGGCAGTTATCGAGACGCACTGCGTCTCACAGAGAATGTGAAATGAACAAAGCTGTTCATTCACCGCCTGACGTACACGATGAAACGAGAAAAATCAAGAATAGGAAGTCGCCATTCTGGTTTCTAAGAAGAAAAGGAAGCAAGTGCAAAGATTTTGAGTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96S53	Dual specificity testis-specific protein kinase 2 OS=Homo sapiens OX=9606 GN=TESK2 PE=1 SV=1
Q63572	Dual specificity testis-specific protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Tesk1 PE=1 SV=1
Q924U5	Dual specificity testis-specific protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Tesk2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001855 (this species only)
Transcription factor family	zf-C2H2 · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF21549 all species →	PRDM2_PR	PR domain zinc finger protein 2, PR domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR001214 all species →	Domain	SET domain	Interproscan
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR046341 all species →	Homologous_superfamily	SET domain superfamily	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR050940 all species →	Family	Actin-regulating Serine/Threonine Kinase	Interproscan
IPR008266 all species →	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46485 all species →	LIM DOMAIN KINASE 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0030036 all species →	Biological Process	actin cytoskeleton organization	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap14.1036.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.