Gene detail

Detailed information of evm.model.Ap14.110 in Astrangia poculata

Genomic Location: Ap14:1023562...1038272
NR annotation: XP_022783105.1, ran-binding protein 3-like [Stylophora pistillata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5R4Y2	Ran-binding protein 3 OS=Pongo abelii OX=9601 GN=RANBP3 PE=2 SV=1
Q9H6Z4	Ran-binding protein 3 OS=Homo sapiens OX=9606 GN=RANBP3 PE=1 SV=1
Q4R4T9	Ran-binding protein 3 OS=Macaca fascicularis OX=9541 GN=RANBP3 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006081 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00638 all species →	Ran_BP1	RanBP1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000156 all species →	Domain	Ran binding domain	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR045255 all species →	Family	Ran binding protein RanBP1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23138 all species →	RAN BINDING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046907 all species →	Biological Process	intracellular transport	Interproscan
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0005643 all species →	Cellular Component	nuclear pore	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006611 all species →	Biological Process	protein export from nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15304	RANBP3; Ran-binding protein 3	-	Human T-cell leukemia virus 1 infection	ko05166	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.