Detailed information of evm.model.Ap14.1261.3.5f15ddf0 in Astrangia poculata

Genomic Location: Ap14:13468607...13481264
NR annotation: KAJ7386429.1, hypothetical protein OS493_008557 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4R3J0RNA 3'-terminal phosphate cyclase OS=Macaca fascicularis OX=9541 GN=RTCA PE=2 SV=1
Q2HJ88RNA 3'-terminal phosphate cyclase OS=Bos taurus OX=9913 GN=RTCA PE=2 SV=1
O00442RNA 3'-terminal phosphate cyclase OS=Homo sapiens OX=9606 GN=RTCA PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001906 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00226
all species →		DnaJDnaJ domainDomainInterproscan
PF01137
all species →		RTCRNA 3'-terminal phosphate cyclaseDomainInterproscan
PF05189
all species →		RTC_insertRNA 3'-terminal phosphate cyclase (RTC), insert domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000228
all species →		FamilyRNA 3'-terminal phosphate cyclaseInterproscan
IPR018253
all species →		Conserved_siteDnaJ domain, conserved siteInterproscan
IPR036553
all species →		Homologous_superfamilyRNA 3'-terminal phosphate cyclase, insert domain superfamilyInterproscan
IPR001623
all species →		DomainDnaJ domainInterproscan
IPR023797
all species →		DomainRNA 3'-terminal phosphate cyclase domainInterproscan
IPR013791
all species →		DomainRNA 3'-terminal phosphate cyclase, insert domainInterproscan
IPR037136
all species →		Homologous_superfamilyRNA 3'-terminal phosphate cyclase domain superfamilyInterproscan
IPR036869
all species →		Homologous_superfamilyChaperone J-domain superfamilyInterproscan
IPR013792
all species →		Homologous_superfamilyRNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/betaInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11096
all species →		RNA 3' TERMINAL PHOSPHATE CYCLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003963
all species →		Molecular FunctionRNA-3'-phosphate cyclase activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006396
all species →		Biological ProcessRNA processingInterproscan
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap14.1261.3.5f15ddf0.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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