Detailed information of evm.model.Ap14.1305 in Astrangia poculata

Genomic Location: Ap14:14082398...14086212
NR annotation: XP_020629621.1, ATP-dependent DNA helicase PIF1-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0R4F1ATP-dependent DNA helicase PIF1 OS=Xenopus laevis OX=8355 GN=pif1 PE=2 SV=1
Q7ZV90ATP-dependent DNA helicase PIF1 OS=Danio rerio OX=7955 GN=pif1 PE=2 SV=1
Q9H611ATP-dependent DNA helicase PIF1 OS=Homo sapiens OX=9606 GN=PIF1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001037 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21530
all species →		Pif1_2B_domDNA helicase Pif1, 2B domainDomainInterproscan
PF05970
all species →		PIF1PIF1-like helicaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049163
all species →		DomainDNA helicase Pif1-like, 2B domainInterproscan
IPR010285
all species →		FamilyDNA helicase Pif1-likeInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR048293
all species →		FamilyDNA helicase PIF1/RRM3/pfh1Interproscan
IPR051055
all species →		FamilyPIF1 DNA helicaseInterproscan
IPR003593
all species →		DomainAAA+ ATPase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47642
all species →		ATP-DEPENDENT DNA HELICASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000723
all species →		Biological Processtelomere maintenanceInterproscan
GO:0003678
all species →		Molecular FunctionDNA helicase activityInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0016887
all species →		Molecular FunctionATP hydrolysis activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K15255PIF1; ATP-dependent DNA helicase PIF1EC:5.6.2.3
Mitochondrial biogenesisko03029deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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