Gene detail

Detailed information of evm.model.Ap14.133_evm.model.Ap14.134 in Astrangia poculata

Genomic Location: Ap14:1246925...1264099
NR annotation: XP_027041376.1, non-specific lipid-transfer protein-like [Pocillopora damicornis]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O62742	Sterol carrier protein 2 OS=Oryctolagus cuniculus OX=9986 GN=SCP2 PE=1 SV=1
P32020	Sterol carrier protein 2 OS=Mus musculus OX=10090 GN=Scp2 PE=1 SV=3
P22307	Sterol carrier protein 2 OS=Homo sapiens OX=9606 GN=SCP2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001850 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00108 all species →	Thiolase_N	Thiolase, N-terminal domain	Domain	Interproscan
PF02803 all species →	Thiolase_C	Thiolase, C-terminal domain	Domain	Interproscan
PF02036 all species →	SCP2	SCP-2 sterol transfer family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036527 all species →	Homologous_superfamily	SCP2 sterol-binding domain superfamily	Interproscan
IPR020613 all species →	Conserved_site	Thiolase, conserved site	Interproscan
IPR020616 all species →	Domain	Thiolase, N-terminal	Interproscan
IPR016039 all species →	Homologous_superfamily	Thiolase-like	Interproscan
IPR020617 all species →	Domain	Thiolase, C-terminal	Interproscan
IPR020615 all species →	Active_site	Thiolase, acyl-enzyme intermediate active site	Interproscan
IPR003033 all species →	Domain	SCP2 sterol-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42870 all species →	ACETYL-COA C-ACETYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016747 all species →	Molecular Function	acyltransferase activity, transferring groups other than amino-acyl groups	Interproscan
GO:0016746 all species →	Molecular Function	acyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08764	SCP2, SCPX; sterol carrier protein 2	EC:2.3.1.176	PPAR signaling pathway	ko03320	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.