Detailed information of evm.model.Ap14.1492 in Astrangia poculata

Genomic Location: Ap14:16052930...16062943
NR annotation: XP_020627266.1, ankyrin repeat domain-containing protein 29-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007130 (this species only)
Ubiquitin familyE3|E3 adaptor Cullin RING|SOCS · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07525
all species →		SOCS_boxSOCS boxDomainInterproscan
PF12796
all species →		Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00023
all species →		AnkAnkyrin repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002110
all species →		RepeatAnkyrin repeatInterproscan
IPR036036
all species →		Homologous_superfamilySOCS box-like domain superfamilyInterproscan
IPR036770
all species →		Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR001496
all species →		DomainSOCS box domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24171
all species →		ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0035556
all species →		Biological Processintracellular signal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap14.1492.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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