Detailed information of evm.model.Ap14.150 in Astrangia poculata

Genomic Location: Ap14:1445735...1453489
NR annotation: RMX54058.1, hypothetical protein pdam_00013149 [Pocillopora damicornis]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P14184Lipopolysaccharide cholinephosphotransferase LicD OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=licD PE=3 SV=2
Q8CG64Ribitol 5-phosphate transferase FKRP OS=Mus musculus OX=10090 GN=Fkrp PE=1 SV=1
Q9H9S5Ribitol 5-phosphate transferase FKRP OS=Homo sapiens OX=9606 GN=FKRP PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000906 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04991
all species →		LicDLicD familyDomainInterproscan
PF02106
all species →		Fanconi_CFanconi anaemia group C proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052942
all species →		FamilyLipopolysaccharide cholinephosphotransferaseInterproscan
IPR007074
all species →		FamilyLicD familyInterproscan
IPR000686
all species →		FamilyFanconi anaemia group C proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43404
all species →		LIPOPOLYSACCHARIDE CHOLINEPHOSPHOTRANSFERASE LICDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0036297
all species →		Biological Processinterstrand cross-link repairInterproscan
GO:0043240
all species →		Cellular ComponentFanconi anaemia nuclear complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap14.150.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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