Gene detail

Detailed information of evm.model.Ap14.1547 in Astrangia poculata

Genomic Location: Ap14:16674828...16693476
NR annotation: XP_020616338.1, uncharacterized protein LOC110054294 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap14.1547

atggcggataacattcggttagaagatctggaagttcttgtgcgctcgccgaactattcgctgagaaaaggcgccgaacaagttgttctggatagagcaatgaaggacaaaaacctcgattttatcatcaacgcttgctacagccaagacgaatttcaagttttgaaggctgtagtagctttggcgatgttggtaaaaaacgccgaacgtcgtgagcgagagaaaatgatagaccacgggacaatggaatcgctttctcactctcttgtttattcggtccaagtgggatacagaaagcttgttgagatgggaggctatgaaattcgcctgcaaaggtgcgcttcagaatctttgtttcaccttatttacgacgaagaagtgtcaaaaattcgtctagcacagtcgaattcggccatcgtcgaagttcttttgcagctgatgtcggaaacaagaaacaaggaagctatgcgatggtgtttattcaccgttcatcaactggcagcttgtgacgcgttgcgacctgaacttttgaacaatggtgtgataccaaaagtctctgaaatgcttgttagaaatcagggagattttgtgctaatgcgaacctgcctacacacgatggtgatgtttgtgaacaataacacagaagatgaagtggtacatcttaaggaaatggctgaatatgatgtgtttagagcagcggtcgtgtcccttcgagctgatgacagtgatctggtatactgggctgctggtttattacaccagtttgctatccaagatctccacaaagcagagatttgcgctataccgaatattatcaaatcactacagaatgtgttgtgttcaagtgaagcgatcttgcagaggttaatcttgcgtgtgctcagctttttgtgtgttggaaatcaatcattcaggacaaatgtgctgcattgctcgtcacttgtagccaggcttccagtgtgtcttgcatctggcgacaatgacattgtacactgggcagtggttttgcttcatgatttgattctttctgaaggatctacaacagcaaatcgtactgcaggattgagggttctatctgtagctaacgacatcatcaagtcccttgtgccgctggcctccagaaaagataacatcttagttcgtttggtggctgaactcattggtctgttttgcactattgaaagtttacaaaacaaagttcttgaagacggtgctttaaaggctgtactgacctattctgtgtctgctgattctgaactgcaattctgggcctcagctcttctcttgaacatggccatgacatctgatgacgttaagaaagagattataacgttgggtgggttgaagccattgatggagttggcaattggagacagcgatcatccacagtgtgcaactcacgctgctaagacgctggttatgctgggatttctggacacgaaaatccctgtggttatcaaatcccttgggtacaagaatggtgaccgtgtgagtatttctatcaacggcaaagagcacagtcctaataaacctggcattaatatcgtggtgatggactttatgacattccaagtgactgaagcagtgtcatttgacaccggacacgacaaggaagctagtgaacagcttgttgagtgtattgacatgatacctgttgggacgttggtgttcattgctgtaagaggagaggcaaactattatatgtctgacaaggcaaaattgtgtctcaaagacctcggaattgaagattacaactttaaaactggtgagctgtggacgtactgtggttataaaaagagagacatagcagttcaagttgctcttcaaaaaggctttgatgcagtggagttggtcacttcacttaatttaggttactatgccaacgaacaggtccaagggtacattctgttgccgctgattgatcttttgatgagtacgccagcatcacttgccatcagcaaagtggctgaactggagctgctcactgttttagcacgacatgacggacataaggaagtgatggtgaagagtgagggtttcatggagtacatagtggagttgattgacaacatggcaagcaagacggcagaccatctcagggctaatccacttgtcatagctcactgtattggtgccatgaaaatcatcgctgccatcagtatcacaaaagaaagccatgataagttcgctgaatgccatgtcctggattcaattcttggcttactttgtctgatcaacaaaacacagctgcaaaagctgagtcagcgaattaattcagagtcaggtacagtggaacaaaccactctcctgggaaatgaaactggagtatttggtggaaatgaaagtgggagactgtctactgtgcctgaagaggtcaaactaactgcaagtggcctaagaactccagtctatggcaacaccacagatttacccactccactgaaaagcactcaattaaaaagcactttactgaaaaagtctagcacgaaaactctccagtcagaaacagtgtcaggagagacgataattcatgacgacttagatgaagcagtctccaacctgactggaatgagcataataacgctgtacaactgtatcgacttgatttccaatctagaggaatcccgtgatcattttttcaaggccggggctatgcagatcatatggtgtcggctgcttactgcaagttcatccacaattcaccatattgaactcgccatagaaatgcttcttaacacatgttgctgtatgactatgctggggaaatattatactgagcttgtagtggaattagacgagcagacaaagacctcatcccttgtgttgagtgctgatcgtctggaggcttccaatccgaactggacgtttgagagcgtgcacgccacgttatgtgtagggcgtagcatgtgtgcggtgccaccttacccttctggatggtactatgaagtgaccctcaggtctacaggcatactacagataggctggcaaactgaagaatgccggtatggccctgagcggggagtaggagtaggcgatgacacgaactcttgcgcgttcgatggtgcaaggtgcaaagtgtggagtggacccccaagtgaacaactcaacaatgactacggtcaagagtggagtcatggcgatgttctgagctgtttgttctcttggaatggagaagtgtcgttctggttgaacggggtagatatgggtgtggcattcagggggttaaaccctggggtaaattggtaccctgcggcatctattgccatggatcaacactgcagcttcaactttggtggcaagccgttcaggtatgacatgcctgatggctacatagccacatgccacgtggtgtccaatttggtcaagaaagttccgctgcgcctgtcgtcctgttggacaccggtcagcggtagttttgatagcatcgtggaagaggatgaagaagtgaatgatgaggaggagttggacgctacagaaacgaccaagactgacaagaccgctcaaagcgttgataaggaagtgtctgacgctgctgtgacggaggagaagccctctgggctttctccagaacccagtatacttgatgaacaagtgcttgactacccaggagattcttctgtagctgattcatctctcgccttatctcctgagcctgtcaatcactccttaacctttgtgactccgtcgtccagtatcttcacaacacctccgagctcctcgtcaaaaccaaccgcgcatgacgtattcttccctgggaccgagtccgagcctacgccgtttcgagtagcgtcgactagtgacagcgcagcatgcgaggaaaagccctcacgagaagaaaagctggtgactagcacgccttatttgggtttgggttccttgagggactctattggtaagcgctttcgagcaggatcgcgtctgcgaacagtaaaaccagcggtaacacctggagaatcctttgtacatgatgagatagagcccatcgcaccatgcctttacttcgaagctgacctcaaatacgcgccaagtcgtgtcaagcaggtgggctttataaatgtggaaacaagagagaaaatctattgtgacatacatgacggtcatcttcagctgcccaagtcgtccagtccttcctcgtacgagcatgaaaacttcagggtcccggatgtcgtcggctgtgctgtcatcgcgtcgggagaaatcatgttcaccttagatggagtgccgactgggcagttttatgaattcccttcaagtaaaccgtcatctatggtcatcgaaaacctttttccgtacatatcctgcacgcgtattcggtgtaattacggtcaacggtcgttcctgtttgaggatgcgaacagcaaagagtcactctttatgagtggagctttgttgcagggattagttacagataactcacggctgtag

Transcript

evm.model.Ap14.1547

ATGGCGGATAACATTCGGTTAGAAGATCTGGAAGTTCTTGTGCGCTCGCCGAACTATTCGCTGAGAAAAGGCGCCGAACAAGTTGTTCTGGATAGAGCAATGAAGGACAAAAACCTCGATTTTATCATCAACGCTTGCTACAGCCAAGACGAATTTCAAGTTTTGAAGGCTGTAGTAGCTTTGGCGATGTTGGTAAAAAACGCCGAACGTCGTGAGCGAGAGAAAATGATAGACCACGGGACAATGGAATCGCTTTCTCACTCTCTTGTTTATTCGGTCCAAGTGGGATACAGAAAGCTTGTTGAGATGGGAGGCTATGAAATTCGCCTGCAAAGGTGCGCTTCAGAATCTTTGTTTCACCTTATTTACGACGAAGAAGTGTCAAAAATTCGTCTAGCACAGTCGAATTCGGCCATCGTCGAAGTTCTTTTGCAGCTGATGTCGGAAACAAGAAACAAGGAAGCTATGCGATGGTGTTTATTCACCGTTCATCAACTGGCAGCTTGTGACGCGTTGCGACCTGAACTTTTGAACAATGGTGTGATACCAAAAGTCTCTGAAATGCTTGTTAGAAATCAGGGAGATTTTGTGCTAATGCGAACCTGCCTACACACGATGGTGATGTTTGTGAACAATAACACAGAAGATGAAGTGGTACATCTTAAGGAAATGGCTGAATATGATGTGTTTAGAGCAGCGGTCGTGTCCCTTCGAGCTGATGACAGTGATCTGGTATACTGGGCTGCTGGTTTATTACACCAGTTTGCTATCCAAGATCTCCACAAAGCAGAGATTTGCGCTATACCGAATATTATCAAATCACTACAGAATGTGTTGTGTTCAAGTGAAGCGATCTTGCAGAGGTTAATCTTGCGTGTGCTCAGCTTTTTGTGTGTTGGAAATCAATCATTCAGGACAAATGTGCTGCATTGCTCGTCACTTGTAGCCAGGCTTCCAGTGTGTCTTGCATCTGGCGACAATGACATTGTACACTGGGCAGTGGTTTTGCTTCATGATTTGATTCTTTCTGAAGGATCTACAACAGCAAATCGTACTGCAGGATTGAGGGTTCTATCTGTAGCTAACGACATCATCAAGTCCCTTGTGCCGCTGGCCTCCAGAAAAGATAACATCTTAGTTCGTTTGGTGGCTGAACTCATTGGTCTGTTTTGCACTATTGAAAGTTTACAAAACAAAGTTCTTGAAGACGGTGCTTTAAAGGCTGTACTGACCTATTCTGTGTCTGCTGATTCTGAACTGCAATTCTGGGCCTCAGCTCTTCTCTTGAACATGGCCATGACATCTGATGACGTTAAGAAAGAGATTATAACGTTGGGTGGGTTGAAGCCATTGATGGAGTTGGCAATTGGAGACAGCGATCATCCACAGTGTGCAACTCACGCTGCTAAGACGCTGGTTATGCTGGGATTTCTGGACACGAAAATCCCTGTGGTTATCAAATCCCTTGGGTACAAGAATGGTGACCGTGTGAGTATTTCTATCAACGGCAAAGAGCACAGTCCTAATAAACCTGGCATTAATATCGTGGTGATGGACTTTATGACATTCCAAGTGACTGAAGCAGTGTCATTTGACACCGGACACGACAAGGAAGCTAGTGAACAGCTTGTTGAGTGTATTGACATGATACCTGTTGGGACGTTGGTGTTCATTGCTGTAAGAGGAGAGGCAAACTATTATATGTCTGACAAGGCAAAATTGTGTCTCAAAGACCTCGGAATTGAAGATTACAACTTTAAAACTGGTGAGCTGTGGACGTACTGTGGTTATAAAAAGAGAGACATAGCAGTTCAAGTTGCTCTTCAAAAAGGCTTTGATGCAGTGGAGTTGGTCACTTCACTTAATTTAGGTTACTATGCCAACGAACAGGTCCAAGGGTACATTCTGTTGCCGCTGATTGATCTTTTGATGAGTACGCCAGCATCACTTGCCATCAGCAAAGTGGCTGAACTGGAGCTGCTCACTGTTTTAGCACGACATGACGGACATAAGGAAGTGATGGTGAAGAGTGAGGGTTTCATGGAGTACATAGTGGAGTTGATTGACAACATGGCAAGCAAGACGGCAGACCATCTCAGGGCTAATCCACTTGTCATAGCTCACTGTATTGGTGCCATGAAAATCATCGCTGCCATCAGTATCACAAAAGAAAGCCATGATAAGTTCGCTGAATGCCATGTCCTGGATTCAATTCTTGGCTTACTTTGTCTGATCAACAAAACACAGCTGCAAAAGCTGAGTCAGCGAATTAATTCAGAGTCAGGTACAGTGGAACAAACCACTCTCCTGGGAAATGAAACTGGAGTATTTGGTGGAAATGAAAGTGGGAGACTGTCTACTGTGCCTGAAGAGGTCAAACTAACTGCAAGTGGCCTAAGAACTCCAGTCTATGGCAACACCACAGATTTACCCACTCCACTGAAAAGCACTCAATTAAAAAGCACTTTACTGAAAAAGTCTAGCACGAAAACTCTCCAGTCAGAAACAGTGTCAGGAGAGACGATAATTCATGACGACTTAGATGAAGCAGTCTCCAACCTGACTGGAATGAGCATAATAACGCTGTACAACTGTATCGACTTGATTTCCAATCTAGAGGAATCCCGTGATCATTTTTTCAAGGCCGGGGCTATGCAGATCATATGGTGTCGGCTGCTTACTGCAAGTTCATCCACAATTCACCATATTGAACTCGCCATAGAAATGCTTCTTAACACATGTTGCTGTATGACTATGCTGGGGAAATATTATACTGAGCTTGTAGTGGAATTAGACGAGCAGACAAAGACCTCATCCCTTGTGTTGAGTGCTGATCGTCTGGAGGCTTCCAATCCGAACTGGACGTTTGAGAGCGTGCACGCCACGTTATGTGTAGGGCGTAGCATGTGTGCGGTGCCACCTTACCCTTCTGGATGGTACTATGAAGTGACCCTCAGGTCTACAGGCATACTACAGATAGGCTGGCAAACTGAAGAATGCCGGTATGGCCCTGAGCGGGGAGTAGGAGTAGGCGATGACACGAACTCTTGCGCGTTCGATGGTGCAAGGTGCAAAGTGTGGAGTGGACCCCCAAGTGAACAACTCAACAATGACTACGGTCAAGAGTGGAGTCATGGCGATGTTCTGAGCTGTTTGTTCTCTTGGAATGGAGAAGTGTCGTTCTGGTTGAACGGGGTAGATATGGGTGTGGCATTCAGGGGGTTAAACCCTGGGGTAAATTGGTACCCTGCGGCATCTATTGCCATGGATCAACACTGCAGCTTCAACTTTGGTGGCAAGCCGTTCAGGTATGACATGCCTGATGGCTACATAGCCACATGCCACGTGGTGTCCAATTTGGTCAAGAAAGTTCCGCTGCGCCTGTCGTCCTGTTGGACACCGGTCAGCGGTAGTTTTGATAGCATCGTGGAAGAGGATGAAGAAGTGAATGATGAGGAGGAGTTGGACGCTACAGAAACGACCAAGACTGACAAGACCGCTCAAAGCGTTGATAAGGAAGTGTCTGACGCTGCTGTGACGGAGGAGAAGCCCTCTGGGCTTTCTCCAGAACCCAGTATACTTGATGAACAAGTGCTTGACTACCCAGGAGATTCTTCTGTAGCTGATTCATCTCTCGCCTTATCTCCTGAGCCTGTCAATCACTCCTTAACCTTTGTGACTCCGTCGTCCAGTATCTTCACAACACCTCCGAGCTCCTCGTCAAAACCAACCGCGCATGACGTATTCTTCCCTGGGACCGAGTCCGAGCCTACGCCGTTTCGAGTAGCGTCGACTAGTGACAGCGCAGCATGCGAGGAAAAGCCCTCACGAGAAGAAAAGCTGGTGACTAGCACGCCTTATTTGGGTTTGGGTTCCTTGAGGGACTCTATTGGTAAGCGCTTTCGAGCAGGATCGCGTCTGCGAACAGTAAAACCAGCGGTAACACCTGGAGAATCCTTTGTACATGATGAGATAGAGCCCATCGCACCATGCCTTTACTTCGAAGCTGACCTCAAATACGCGCCAAGTCGTGTCAAGCAGGTGGGCTTTATAAATGTGGAAACAAGAGAGAAAATCTATTGTGACATACATGACGGTCATCTTCAGCTGCCCAAGTCGTCCAGTCCTTCCTCGTACGAGCATGAAAACTTCAGGGTCCCGGATGTCGTCGGCTGTGCTGTCATCGCGTCGGGAGAAATCATGTTCACCTTAGATGGAGTGCCGACTGGGCAGTTTTATGAATTCCCTTCAAGTAAACCGTCATCTATGGTCATCGAAAACCTTTTTCCGTACATATCCTGCACGCGTATTCGGTGTAATTACGGTCAACGGTCGTTCCTGTTTGAGGATGCGAACAGCAAAGAGTCACTCTTTATGAGTGGAGCTTTGTTGCAGGGATTAGTTACAGATAACTCACGGCTGTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96DX4	RING finger and SPRY domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RSPRY1 PE=1 SV=1
Q5R881	RING finger and SPRY domain-containing protein 1 OS=Pongo abelii OX=9601 GN=RSPRY1 PE=2 SV=1
Q95LP3	RING finger and SPRY domain-containing protein 1 OS=Macaca fascicularis OX=9541 GN=RSPRY1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003328 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15711 all species →	ILEI	Interleukin-like EMT inducer	Domain	Interproscan
PF00622 all species →	SPRY	SPRY domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039477 all species →	Domain	ILEI/PANDER domain	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR043136 all species →	Homologous_superfamily	B30.2/SPRY domain superfamily	Interproscan
IPR001870 all species →	Domain	B30.2/SPRY domain	Interproscan
IPR003877 all species →	Domain	SPRY domain	Interproscan
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR045129 all species →	Family	E3 ubiquitin-protein ligase RNF123/RSPRY1-like	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13363 all species →	RING FINGER AND SRY DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004842 all species →	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0051603 all species →	Biological Process	proteolysis involved in protein catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap14.1547.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.