Detailed information of evm.model.Ap14.1563 in Astrangia poculata

Genomic Location: Ap14:16907074...16913180
NR annotation: PFX11829.1, Malate synthase, partial [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P21328RNA-directed DNA polymerase from mobile element jockey OS=Drosophila melanogaster OX=7227 GN=pol PE=1 SV=1
P21329RNA-directed DNA polymerase from mobile element jockey OS=Drosophila funebris OX=7221 GN=jockeypol PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010721 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078
all species →		RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF04607
all species →		RelA_SpoTRegion found in RelA / SpoT proteinsFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007685
all species →		DomainRelA/SpoTInterproscan
IPR000477
all species →		DomainReverse transcriptase domainInterproscan
IPR043519
all species →		Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33332
all species →		REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0015969
all species →		Biological Processguanosine tetraphosphate metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap14.1563.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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