Detailed information of evm.model.Ap14.1603 in Astrangia poculata

Genomic Location: Ap14:17327835...17330177
NR annotation: XP_020629122.1, inhibin beta B chain-like isoform X3 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q98TB4Growth/differentiation factor 8 OS=Oreochromis mossambicus OX=8127 GN=gdf-8 PE=2 SV=1
Q5I3Q2Growth/differentiation factor 8 OS=Epinephelus coioides OX=94232 GN=gdf-8 PE=1 SV=1
P42917Inhibin beta B chain OS=Bos taurus OX=9913 GN=INHBB PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002324 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00019
all species →		TGF_betaTransforming growth factor beta like domainDomainInterproscan
PF00688
all species →		TGFb_propeptideTGF-beta propeptideFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015615
all species →		FamilyTransforming growth factor-beta-relatedInterproscan
IPR001839
all species →		DomainTransforming growth factor-beta, C-terminalInterproscan
IPR001111
all species →		DomainTGF-beta, propeptideInterproscan
IPR017948
all species →		Conserved_siteTransforming growth factor beta, conserved siteInterproscan
IPR029034
all species →		Homologous_superfamilyCystine-knot cytokineInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11848
all species →		TGF-BETA FAMILYInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005125
all species →		Molecular Functioncytokine activityInterproscan
GO:0005576
all species →		Cellular Componentextracellular regionInterproscan
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan
GO:0008083
all species →		Molecular Functiongrowth factor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K22687INHBB; inhibin beta B chain-Cytokines and neuropeptidesko04052deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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