Detailed information of evm.model.Ap14.180 in Astrangia poculata

Genomic Location: Ap14:1798191...1800600
NR annotation: KAJ7323742.1, Far upstream element-binding protein 3 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000460 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00013
all species →		KH_1KH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004087
all species →		DomainK Homology domainInterproscan
IPR036612
all species →		Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR004088
all species →		DomainK Homology domain, type 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10288
all species →		KH DOMAIN CONTAINING RNA BINDING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0003729
all species →		Molecular FunctionmRNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0010468
all species →		Biological Processregulation of gene expressionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap14.180.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP