Detailed information of evm.model.Ap14.1827 in Astrangia poculata

Genomic Location: Ap14:20055011...20056655
NR annotation: KAJ7386149.1, hypothetical protein OS493_012495 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9RWH9Uracil-DNA glycosylase OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1) OX=243230 GN=ung PE=1 SV=1
Q98PV4Uracil-DNA glycosylase OS=Mycoplasmopsis pulmonis (strain UAB CTIP) OX=272635 GN=ung PE=3 SV=1
Q4QPM6Uracil-DNA glycosylase OS=Haemophilus influenzae (strain 86-028NP) OX=281310 GN=ung PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001192 (this species only)

 Pfam domain
No Pfam domain signature was detected for evm.model.Ap14.1827. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR002043
all species →		FamilyUracil-DNA glycosylase family 1Interproscan
IPR005122
all species →		DomainUracil-DNA glycosylase-likeInterproscan
IPR036895
all species →		Homologous_superfamilyUracil-DNA glycosylase-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11264
all species →		URACIL-DNA GLYCOSYLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004844
all species →		Molecular Functionuracil DNA N-glycosylase activityInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0006284
all species →		Biological Processbase-excision repairInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0097510
all species →		Biological Processbase-excision repair, AP site formation via deaminated base removalInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap14.1827.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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