Detailed information of evm.model.Ap14.1829 in Astrangia poculata

Genomic Location: Ap14:20067914...20068777
NR annotation: XP_020624666.1, uncharacterized protein LOC110062144 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4ZPC2Uracil-DNA glycosylase OS=Pseudomonas syringae pv. syringae (strain B728a) OX=205918 GN=ung PE=3 SV=1
A6VLV4Uracil-DNA glycosylase OS=Actinobacillus succinogenes (strain ATCC 55618 / DSM 22257 / CCUG 43843 / 130Z) OX=339671 GN=ung PE=3 SV=1
Q48ET5Uracil-DNA glycosylase OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) OX=264730 GN=ung PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001192 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03167
all species →		UDGUracil DNA glycosylase superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005122
all species →		DomainUracil-DNA glycosylase-likeInterproscan
IPR002043
all species →		FamilyUracil-DNA glycosylase family 1Interproscan
IPR036895
all species →		Homologous_superfamilyUracil-DNA glycosylase-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11264
all species →		URACIL-DNA GLYCOSYLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004844
all species →		Molecular Functionuracil DNA N-glycosylase activityInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0006284
all species →		Biological Processbase-excision repairInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0097510
all species →		Biological Processbase-excision repair, AP site formation via deaminated base removalInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K03648UNG, UDG; uracil-DNA glycosylaseEC:3.2.2.27
DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP