Detailed information of evm.model.Ap14.1831 in Astrangia poculata

Genomic Location: Ap14:20075385...20076083
NR annotation: XP_020624666.1, uncharacterized protein LOC110062144 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8R634Uracil-DNA glycosylase OS=Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355) OX=190304 GN=ung PE=3 SV=1
C3P2F8Uracil-DNA glycosylase OS=Bacillus anthracis (strain A0248) OX=592021 GN=ung PE=3 SV=1
C3LFS7Uracil-DNA glycosylase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) OX=568206 GN=ung PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001192 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03167
all species →		UDGUracil DNA glycosylase superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036895
all species →		Homologous_superfamilyUracil-DNA glycosylase-like domain superfamilyInterproscan
IPR002043
all species →		FamilyUracil-DNA glycosylase family 1Interproscan
IPR005122
all species →		DomainUracil-DNA glycosylase-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11264
all species →		URACIL-DNA GLYCOSYLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004844
all species →		Molecular Functionuracil DNA N-glycosylase activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0006284
all species →		Biological Processbase-excision repairInterproscan
GO:0097510
all species →		Biological Processbase-excision repair, AP site formation via deaminated base removalInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K03648UNG, UDG; uracil-DNA glycosylaseEC:3.2.2.27
DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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