Detailed information of evm.model.Ap14.1834 in Astrangia poculata

Genomic Location: Ap14:20088224...20089385
NR annotation: XP_020624666.1, uncharacterized protein LOC110062144 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B2V017Uracil-DNA glycosylase OS=Clostridium botulinum (strain Alaska E43 / Type E3) OX=508767 GN=ung PE=3 SV=1
B2TQZ9Uracil-DNA glycosylase OS=Clostridium botulinum (strain Eklund 17B / Type B) OX=935198 GN=ung PE=3 SV=1
B3ERG6Uracil-DNA glycosylase OS=Amoebophilus asiaticus (strain 5a2) OX=452471 GN=ung PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001192 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03167
all species →		UDGUracil DNA glycosylase superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002043
all species →		FamilyUracil-DNA glycosylase family 1Interproscan
IPR005122
all species →		DomainUracil-DNA glycosylase-likeInterproscan
IPR036895
all species →		Homologous_superfamilyUracil-DNA glycosylase-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11264
all species →		URACIL-DNA GLYCOSYLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004844
all species →		Molecular Functionuracil DNA N-glycosylase activityInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0006284
all species →		Biological Processbase-excision repairInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0097510
all species →		Biological Processbase-excision repair, AP site formation via deaminated base removalInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap14.1834.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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